RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W TMA17Q12513 150 aa4.71□□□□□ -1.66
SHP1YBL058W RPL21BQ12672 160 aaKnown RBP4.71□□□□□ -1.66
SHP1YBL058W RPP2AP05319 106 aaKnown RBP4.7□□□□□ -1.66
SHP1YBL058W COX9P07255 59 aa4.7□□□□□ -1.66
SHP1YBL058W CNE1P27825 502 aa4.7□□□□□ -1.66
SHP1YBL058W CPR5P35176 225 aa4.7□□□□□ -1.66
SHP1YBL058W YJR120WP47157 116 aa4.7□□□□□ -1.66
SHP1YBL058W TTI2P47168 421 aa4.7□□□□□ -1.66
SHP1YBL058W YGR054WP53235 642 aaKnown RBP4.7□□□□□ -1.66
SHP1YBL058W YNL234WP53857 426 aa4.7□□□□□ -1.66
SHP1YBL058W STD1Q02794 444 aa4.7□□□□□ -1.66
SHP1YBL058W YLR283WQ05867 314 aa4.7□□□□□ -1.66
SHP1YBL058W YOR186WQ08560 144 aa4.7□□□□□ -1.66
SHP1YBL058W FRE5Q08908 694 aa4.7□□□□□ -1.66
SHP1YBL058W VAM3Q12241 283 aa4.7□□□□□ -1.66
SHP1YBL058W ATO3Q12359 275 aa4.7□□□□□ -1.66
SHP1YBL058W MATALPHA1P0CY06 175 aa4.69□□□□□ -1.66
SHP1YBL058W HMLALPHA1P0CY07 175 aa4.69□□□□□ -1.66
SHP1YBL058W PET122P10355 254 aa4.69□□□□□ -1.66
SHP1YBL058W ATG22P25568 528 aa4.69□□□□□ -1.66
SHP1YBL058W FEN2P25621 512 aaKnown RBP4.69□□□□□ -1.66
SHP1YBL058W FUN26P31381 517 aa4.69□□□□□ -1.66
SHP1YBL058W MTC7P32633 139 aa4.69□□□□□ -1.66
SHP1YBL058W BUD8P41698 603 aa4.69□□□□□ -1.66
SHP1YBL058W RPA43P46669 326 aa4.69□□□□□ -1.66
SHP1YBL058W YJR056CP47115 236 aa4.69□□□□□ -1.66
SHP1YBL058W DUO1P53168 247 aaKnown RBP4.69□□□□□ -1.66
SHP1YBL058W PAU12P53343 120 aa4.69□□□□□ -1.66
SHP1YBL058W MIX17Q03667 156 aa4.69□□□□□ -1.66
SHP1YBL058W PEX30Q06169 523 aa4.69□□□□□ -1.66
SHP1YBL058W YOL114CQ12322 202 aa4.69□□□□□ -1.66
SHP1YBL058W LAS17Q12446 633 aa4.69□□□□□ -1.66
SHP1YBL058W YPR1Q12458 312 aa4.69□□□□□ -1.66
SHP1YBL058W FRE6Q12473 712 aa4.69□□□□□ -1.66
SHP1YBL058W YLR358CO13565 187 aa4.68□□□□□ -1.66
SHP1YBL058W ADK1P07170 222 aaKnown RBP4.68□□□□□ -1.66
SHP1YBL058W YCR101CP25607 182 aa4.68□□□□□ -1.66
SHP1YBL058W RCN1P36054 211 aa4.68□□□□□ -1.66
SHP1YBL058W MRPL36P36531 177 aa4.68□□□□□ -1.66
SHP1YBL058W PRS2P38620 318 aaKnown RBP4.68□□□□□ -1.66
SHP1YBL058W SOP4P39543 234 aaPredicted RBP4.68□□□□□ -1.66
SHP1YBL058W NOP16P40007 231 aaKnown RBP4.68□□□□□ -1.66
SHP1YBL058W YJR096WP47137 282 aa4.68□□□□□ -1.66
SHP1YBL058W EFM3P47163 339 aa4.68□□□□□ -1.66
SHP1YBL058W YGR151CP53287 111 aa4.68□□□□□ -1.66
SHP1YBL058W YDR415CQ04033 374 aaPredicted RBP4.68□□□□□ -1.66
SHP1YBL058W ATG33Q06485 197 aa4.68□□□□□ -1.66
SHP1YBL058W YGK3Q12222 375 aaPredicted RBP4.68□□□□□ -1.66
SHP1YBL058W ORT1Q12375 292 aa4.68□□□□□ -1.66
SHP1YBL058W MRPL23Q12487 163 aaPredicted RBP4.68□□□□□ -1.66
SHP1YBL058W MRP1P10662 321 aaKnown RBP4.67□□□□□ -1.66
SHP1YBL058W INO2P26798 304 aa4.67□□□□□ -1.66
SHP1YBL058W SNC2P33328 115 aa4.67□□□□□ -1.66
SHP1YBL058W YKL063CP35725 167 aa4.67□□□□□ -1.66
SHP1YBL058W PAU24P38155 120 aa4.67□□□□□ -1.66
SHP1YBL058W YLF2P38746 405 aa4.67□□□□□ -1.66
SHP1YBL058W CCS1P40202 249 aaKnown RBP4.67□□□□□ -1.66
SHP1YBL058W WWM1P43582 211 aaKnown RBP4.67□□□□□ -1.66
SHP1YBL058W HSK3P69852 69 aa4.67□□□□□ -1.66
SHP1YBL058W HOF1Q05080 669 aa4.67□□□□□ -1.66
SHP1YBL058W YBR182C-AQ8TGU6 64 aa4.67□□□□□ -1.66
SHP1YBL058W ATG40Q99325 256 aa4.67□□□□□ -1.66
SHP1YBL058W FAR1P21268 830 aa4.66□□□□□ -1.66
SHP1YBL058W PEX4P29340 183 aa4.66□□□□□ -1.66
SHP1YBL058W VMA6P32366 345 aaKnown RBP4.66□□□□□ -1.66
SHP1YBL058W ARO4P32449 370 aaKnown RBP4.66□□□□□ -1.66
SHP1YBL058W PMU1P36069 295 aa4.66□□□□□ -1.66
SHP1YBL058W UMP1P38293 148 aa4.66□□□□□ -1.66
SHP1YBL058W YBR285WP38354 144 aa4.66□□□□□ -1.66
SHP1YBL058W EGD2P38879 174 aaKnown RBP4.66□□□□□ -1.66
SHP1YBL058W FLO5P38894 1075 aa4.66□□□□□ -1.66
SHP1YBL058W MRPL13Q02204 264 aa4.66□□□□□ -1.66
SHP1YBL058W YOR192C-CQ3E736 78 aa4.66□□□□□ -1.66
SHP1YBL058W Q0142Q9ZZW4 58 aa4.66□□□□□ -1.66
SHP1YBL058W YBL010CP32788 280 aa4.65□□□□□ -1.67
SHP1YBL058W PRS4P38063 326 aaPredicted RBP4.65□□□□□ -1.67
SHP1YBL058W GPG1P53130 126 aa4.65□□□□□ -1.67
SHP1YBL058W MRPL22P53881 309 aa4.65□□□□□ -1.67
SHP1YBL058W RRP17Q04031 235 aaPredicted RBP4.65□□□□□ -1.67
SHP1YBL058W NEJ1Q06148 342 aa4.65□□□□□ -1.67
SHP1YBL058W YLL053CP0CD98 152 aa4.64□□□□□ -1.67
SHP1YBL058W DPB2P24482 689 aaPredicted RBP4.64□□□□□ -1.67
SHP1YBL058W RNA14P25298 677 aaKnown RBP4.64□□□□□ -1.67
SHP1YBL058W ERG24P32462 438 aaKnown RBP4.64□□□□□ -1.67
SHP1YBL058W YBR144CP34215 104 aa4.64□□□□□ -1.67
SHP1YBL058W ECM4P36156 370 aa4.64□□□□□ -1.67
SHP1YBL058W SWD3P38123 315 aa4.64□□□□□ -1.67
SHP1YBL058W YJL118WP47022 219 aa4.64□□□□□ -1.67
SHP1YBL058W YIP1P53039 248 aa4.64□□□□□ -1.67
SHP1YBL058W SCW4P53334 386 aaKnown RBP4.64□□□□□ -1.67
SHP1YBL058W BUD25P85052 153 aa4.64□□□□□ -1.67
SHP1YBL058W SRL4Q03085 281 aa4.64□□□□□ -1.67
SHP1YBL058W ATG17Q06410 417 aa4.64□□□□□ -1.67
SHP1YBL058W MDM36Q06820 579 aa4.64□□□□□ -1.67
SHP1YBL058W RXT3Q07458 294 aa4.64□□□□□ -1.67
SHP1YBL058W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
SHP1YBL058W YOL118CQ08259 102 aa4.64□□□□□ -1.67
SHP1YBL058W JID1Q12350 301 aa4.64□□□□□ -1.67
SHP1YBL058W YLR099W-AQ3E798 87 aa4.64□□□□□ -1.67
SHP1YBL058W YHR212W-AP0CX91 67 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms