RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C POL2P21951 2222 aaKnown RBP0.87□□□□□ -2.27
YAR009CYAR009C DAL80P26343 269 aa0.87□□□□□ -2.27
YAR009CYAR009C YHL044WP38727 235 aa0.87□□□□□ -2.27
YAR009CYAR009C POP2P39008 433 aa0.87□□□□□ -2.27
YAR009CYAR009C EDC2P40023 145 aaPredicted RBP0.87□□□□□ -2.27
YAR009CYAR009C SPO73P40031 143 aa0.87□□□□□ -2.27
YAR009CYAR009C DIE2P50076 525 aa0.87□□□□□ -2.27
YAR009CYAR009C OKP1P53298 406 aa0.87□□□□□ -2.27
YAR009CYAR009C MPA43P53583 542 aaPredicted RBP0.87□□□□□ -2.27
YAR009CYAR009C VPS20Q04272 221 aa0.87□□□□□ -2.27
YAR009CYAR009C PBP4Q07362 185 aaKnown RBP0.87□□□□□ -2.27
YAR009CYAR009C RRP40Q08285 240 aaKnown RBP0.87□□□□□ -2.27
YAR009CYAR009C YOR292CQ08743 309 aa0.87□□□□□ -2.27
YAR009CYAR009C RTC5Q12108 567 aaKnown RBP0.87□□□□□ -2.27
YAR009CYAR009C PAA1Q12447 191 aaKnown RBP0.87□□□□□ -2.27
YAR009CYAR009C KRR1P25586 316 aaPredicted RBP0.87□□□□□ -2.27
YAR009CYAR009C MRPL6P32904 214 aa0.87□□□□□ -2.27
YAR009CYAR009C YKL162CP36052 402 aa0.87□□□□□ -2.27
YAR009CYAR009C FET3P38993 636 aa0.87□□□□□ -2.27
YAR009CYAR009C APQ12P40532 138 aa0.87□□□□□ -2.27
YAR009CYAR009C GLR1P41921 483 aaKnown RBP0.87□□□□□ -2.27
YAR009CYAR009C BLM10P43583 2143 aa0.87□□□□□ -2.27
YAR009CYAR009C XPT1P47165 209 aa0.87□□□□□ -2.27
YAR009CYAR009C BOL2P53082 120 aa0.87□□□□□ -2.27
YAR009CYAR009C ARC18Q05933 178 aaKnown RBP0.87□□□□□ -2.27
YAR009CYAR009C YPR127WQ06494 345 aa0.87□□□□□ -2.27
YAR009CYAR009C YPR063CQ12160 140 aa0.87□□□□□ -2.27
YAR009CYAR009C YOR114WQ12219 294 aa0.87□□□□□ -2.27
YAR009CYAR009C SEY1Q99287 776 aa0.87□□□□□ -2.27
YAR009CYAR009C TDH3P00359 332 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27not detected
YAR009CYAR009C MET2P08465 486 aa0.86□□□□□ -2.27
YAR009CYAR009C RPS23AP0CX29 145 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C RPS23BP0CX30 145 aa0.86□□□□□ -2.27
YAR009CYAR009C IFM1P25038 676 aa0.86□□□□□ -2.27
YAR009CYAR009C RPL16BP26785 198 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C MCH2P36032 473 aa0.86□□□□□ -2.27
YAR009CYAR009C ECM14P38836 430 aa0.86□□□□□ -2.27
YAR009CYAR009C YJL118WP47022 219 aa0.86□□□□□ -2.27
YAR009CYAR009C DIA1P54005 336 aa0.86□□□□□ -2.27
YAR009CYAR009C ATG38Q05789 226 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C YPL264CQ08980 353 aa0.86□□□□□ -2.27
YAR009CYAR009C IES3Q12345 250 aa0.86□□□□□ -2.27
YAR009CYAR009C MRPL23Q12487 163 aaPredicted RBP0.86□□□□□ -2.27
YAR009CYAR009C DCP1Q12517 231 aaPredicted RBP0.86□□□□□ -2.27
YAR009CYAR009C TOM40P23644 387 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C ARO4P32449 370 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C UBC6P33296 250 aaPredicted RBP0.86□□□□□ -2.27
YAR009CYAR009C AIM29P36154 155 aa0.86□□□□□ -2.27
YAR009CYAR009C RIB4P50861 169 aaPredicted RBP0.86□□□□□ -2.27
YAR009CYAR009C ERG25P53045 309 aa0.86□□□□□ -2.27
YAR009CYAR009C VOA1P53262 265 aa0.86□□□□□ -2.27
YAR009CYAR009C ABZ2Q03266 374 aa0.86□□□□□ -2.27
YAR009CYAR009C YLR446WQ06204 433 aa0.86□□□□□ -2.27
YAR009CYAR009C EMP46Q12396 444 aa0.86□□□□□ -2.27
YAR009CYAR009C YLR462WO13556 202 aa0.86□□□□□ -2.27
YAR009CYAR009C RAD7P06779 565 aa0.86□□□□□ -2.27
YAR009CYAR009C GPA2P10823 449 aa0.86□□□□□ -2.27
YAR009CYAR009C GCD2P12754 651 aaPredicted RBP0.86□□□□□ -2.27
YAR009CYAR009C MSS116P15424 664 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C SAR1P20606 190 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C VPH2P32341 215 aa0.86□□□□□ -2.27
YAR009CYAR009C RPC37P36121 282 aa0.86□□□□□ -2.27
YAR009CYAR009C YHL049CP38722 271 aa0.86□□□□□ -2.27
YAR009CYAR009C COG3P40094 801 aa0.86□□□□□ -2.27
YAR009CYAR009C YJL144WP47009 104 aa0.86□□□□□ -2.27
YAR009CYAR009C ACT1P60010 375 aaKnown RBP0.86□□□□□ -2.27
YAR009CYAR009C ATP6P00854 259 aa0.85□□□□□ -2.27
YAR009CYAR009C GPX1P36014 167 aa0.85□□□□□ -2.27
YAR009CYAR009C RIB1P38066 345 aa0.85□□□□□ -2.27
YAR009CYAR009C NSG1P38837 291 aa0.85□□□□□ -2.27
YAR009CYAR009C RMD6P39975 231 aa0.85□□□□□ -2.27
YAR009CYAR009C PHB1P40961 287 aa0.85□□□□□ -2.27
YAR009CYAR009C LOH1P47055 219 aa0.85□□□□□ -2.27
YAR009CYAR009C COX16P47081 118 aa0.85□□□□□ -2.27
YAR009CYAR009C IBA57P47158 497 aa0.85□□□□□ -2.27
YAR009CYAR009C YGR219WP53307 113 aa0.85□□□□□ -2.27
YAR009CYAR009C DBP6P53734 629 aaKnown RBP0.85□□□□□ -2.27
YAR009CYAR009C SED1Q01589 338 aa0.85□□□□□ -2.27
YAR009CYAR009C YPL039WQ03080 316 aa0.85□□□□□ -2.27
YAR009CYAR009C ECM18Q04623 453 aa0.85□□□□□ -2.27
YAR009CYAR009C GTO3Q04806 366 aa0.85□□□□□ -2.27
YAR009CYAR009C SEI1Q06058 285 aa0.85□□□□□ -2.27
YAR009CYAR009C JLP1Q12358 412 aa0.85□□□□□ -2.27
YAR009CYAR009C RPL31AP0C2H8 113 aaKnown RBP0.85□□□□□ -2.27
YAR009CYAR009C DPB2P24482 689 aaPredicted RBP0.85□□□□□ -2.27
YAR009CYAR009C YCR090CP25654 182 aaKnown RBP0.85□□□□□ -2.27
YAR009CYAR009C RPL5P26321 297 aaKnown RBP0.85□□□□□ -2.27
YAR009CYAR009C YPC1P38298 316 aa0.85□□□□□ -2.27
YAR009CYAR009C MED8P38304 223 aa0.85□□□□□ -2.27
YAR009CYAR009C MNN9P39107 395 aaKnown RBP0.85□□□□□ -2.27
YAR009CYAR009C SOK1P40317 901 aa0.85□□□□□ -2.27
YAR009CYAR009C YFR045WP43617 309 aa0.85□□□□□ -2.27
YAR009CYAR009C SSQ1Q05931 657 aaPredicted RBP0.85□□□□□ -2.27
YAR009CYAR009C DXO1Q06349 442 aa0.85□□□□□ -2.27
YAR009CYAR009C YLL007CQ07799 665 aa0.85□□□□□ -2.27
YAR009CYAR009C YPR011CQ12251 326 aa0.85□□□□□ -2.27
YAR009CYAR009C YOR343CQ12484 108 aa0.85□□□□□ -2.27
YAR009CYAR009C YJL197C-AP0C5P0 93 aa0.85□□□□□ -2.27
YAR009CYAR009C IMP1P28627 190 aa0.85□□□□□ -2.27
YAR009CYAR009C CAT2P32796 670 aaKnown RBP0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms