RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PTPN21Q16825 1174 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 KIAA0753Q2KHM9 967 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 ZC2HC1CQ53FD0 456 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-234ENST00000642041 ZBTB8OSQ8IWT0 167 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 EFHBQ8N7U6 833 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 TMC2Q8TDI7 906 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 PSPC1Q8WXF1 523 aaKnown RBP18.63■□□□□ 0.57
PHGDH-234ENST00000642041 BORCS6Q96GS4 357 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 RPGRIP1Q96KN7 1286 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 PPP2R2CQ9Y2T4 447 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 USP15Q9Y4E8 981 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-234ENST00000642041 DNAH14Q0VDD8 3507 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 K7ERI5 159 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 SLC16A4O15374 487 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 F2P00734 622 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 PDGFBP01127 241 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-234ENST00000642041 LGALS2P05162 132 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 TNNT1P13805 278 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 AP3M2P53677 418 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 BFSP1Q12934 665 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 SURF1Q15526 300 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 C10orf76Q5T2E6 689 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 E4F1Q66K89 784 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-234ENST00000642041 PLA2G4FQ68DD2 849 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 ZPBP2Q6X784 338 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 SERINC5Q86VE9 423 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 UBE2Q2Q8WVN8 375 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 CLP1Q92989 425 aaKnown RBP18.62■□□□□ 0.57
PHGDH-234ENST00000642041 NFKBIZQ9BYH8 718 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 FGFBP2Q9BYJ0 223 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 TSGA10Q9BZW7 698 aa18.62■□□□□ 0.57
PHGDH-234ENST00000642041 POLR3FQ9H1D9 316 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-234ENST00000642041 EPN1Q9Y6I3 576 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-234ENST00000642041 IGKV6-21A0A0C4DH24 114 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 RRN3P2A6NIE6 340 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 CLIC2O15247 247 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 GFPT2O94808 682 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 CAMK1Q14012 370 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 PCBP1Q15365 356 aaKnown RBP eCLIP18.61■□□□□ 0.57
PHGDH-234ENST00000642041 SPA17Q15506 151 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 KYAT1Q16773 422 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 TCERG1LQ5VWI1 586 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 NYAP1Q6ZVC0 841 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 MAEAQ7L5Y9 396 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 VPS36Q86VN1 386 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 SLC35C1Q96A29 364 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 CCDC42Q96M95 316 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 PCYT2Q99447 389 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 PLVAPQ9BX97 442 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 HAUS4Q9H6D7 363 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 USP20Q9Y2K6 914 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 TELO2Q9Y4R8 837 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 STYXL1Q9Y6J8 313 aa18.61■□□□□ 0.57
PHGDH-234ENST00000642041 ZMYM2Q9UBW7 1377 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 EIF3CLB5ME19 914 aaKnown RBP18.6■□□□□ 0.57
PHGDH-234ENST00000642041 ATF7P17544 494 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-234ENST00000642041 ATP4AP20648 1035 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 TUBB4BP68371 445 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 HIC1Q14526 733 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 SFMBT2Q5VUG0 894 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 APBB1IPQ7Z5R6 666 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-234ENST00000642041 EIF3CQ99613 913 aaKnown RBP18.6■□□□□ 0.57
PHGDH-234ENST00000642041 XPNPEP1Q9NQW7 623 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 HSPBP1Q9NZL4 362 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 AIPL1Q9NZN9 384 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 ARID2Q68CP9 1835 aa18.6■□□□□ 0.57
PHGDH-234ENST00000642041 ZNF233A6NK53 670 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 SERPING1P05155 500 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 RPLP2P05387 115 aaKnown RBP18.59■□□□□ 0.57
PHGDH-234ENST00000642041 FMO5P49326 533 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 LIG4P49917 911 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 VAMP7P51809 220 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 ETF1P62495 437 aaKnown RBP18.59■□□□□ 0.57
PHGDH-234ENST00000642041 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-234ENST00000642041 DGLUCYQ7Z3D6 616 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 TRIM50Q86XT4 487 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 GPD1LQ8N335 351 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 APBB2Q92870 758 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 BICD1Q96G01 975 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 PPP1R13BQ96KQ4 1090 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 CEP89Q96ST8 783 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 ADGRG1Q9Y653 693 aa18.59■□□□□ 0.57
PHGDH-234ENST00000642041 ACACBO00763 2458 aa18.58■□□□□ 0.57
PHGDH-234ENST00000642041 ATP8B3O60423 1300 aa18.58■□□□□ 0.57
PHGDH-234ENST00000642041 ADGRA3Q8IWK6 1321 aa18.58■□□□□ 0.57
PHGDH-234ENST00000642041 HNRNPDLO14979 420 aaKnown RBP18.58■□□□□ 0.56
PHGDH-234ENST00000642041 KRT86O43790 486 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 KIF5CO60282 957 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 ZC3H11AO75152 810 aaKnown RBP eCLIP18.58■□□□□ 0.56
PHGDH-234ENST00000642041 CSPG5O95196 566 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 NDUFA10O95299 355 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 ZNF286BP0CG31 522 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 PLCB4Q15147 1175 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 ARHGAP29Q52LW3 1261 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 DCAF17Q5H9S7 520 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-234ENST00000642041 ADGRD2Q7Z7M1 963 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 TMEM105Q8N8V8 129 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 POMGNT1Q8WZA1 660 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 SUSD6Q92537 303 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 CALR3Q96L12 384 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms