RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 CHI3L2Q15782 390 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TRMT5Q32P41 509 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 MTDHQ86UE4 582 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 MARCH10Q8NA82 808 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ENKURQ8TC29 256 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 GIPC3Q8TF64 312 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 RFFLQ8WZ73 363 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 PRCCQ92733 491 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ZNF184Q99676 751 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ATP6V1HQ9UI12 483 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 A0A1B0GTH6 734 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 COX10Q12887 443 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TFDP2Q14188 446 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 CDO1Q16878 200 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 MEI1Q5TIA1 1274 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TMC4Q7Z404 712 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 FGD2Q7Z6J4 655 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 LRRC49Q8IUZ0 686 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ANKRD36BP1Q96IX9 119 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 OLFM1Q99784 485 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ADAM22Q9P0K1 906 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 MYRFQ9Y2G1 1151 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TELO2Q9Y4R8 837 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 CSADQ9Y600 493 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 CLASP2O75122 1294 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ALDH5A1P51649 535 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 PTK7Q13308 1070 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ATG14Q6ZNE5 492 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TC2NQ8N9U0 490 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 SHCBP1LQ9BZQ2 653 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 PCMTD2Q9NV79 361 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 SUGT1Q9Y2Z0 365 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ZBED4O75132 1171 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ZNF23P17027 643 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TUBA4AP68366 448 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 SMAD1Q15797 465 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 RNF135Q8IUD6 432 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 SYTL1Q8IYJ3 562 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 HPS1Q92902 700 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 FAM149B1Q96BN6 582 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 C9orf72Q96LT7 481 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 APOL4Q9BPW4 351 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ADPGKQ9BRR6 497 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TMEM161AQ9NX61 479 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 GALNT8Q9NY28 637 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 CYP39A1Q9NYL5 469 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 PRR23AA6NEV1 266 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 PTGS2P35354 604 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 TRIQKQ629K1 86 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 RRM2BQ7LG56 351 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 JAMLQ86YT9 394 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 PASD1Q8IV76 773 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 DENND6AQ8IWF6 608 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 PROM2Q8N271 834 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 AGAP11Q8TF27 550 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 IL1RL2Q9HB29 575 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 EPB41L4AQ9HCS5 686 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 HEY1Q9Y5J3 304 aa11.44□□□□□ -0.58
KCNMA1-259ENST00000639406 ITIH6Q6UXX5 1313 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 SYNDIG1LA6NDD5 238 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 CNOT3O75175 753 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 FTLP02792 175 aaPredicted RBP11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 TCF3P15923 654 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 PDZK1Q5T2W1 519 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 LAYNQ6UX15 382 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 RSPH1Q8WYR4 309 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 RPRD1BQ9NQG5 326 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 KLHL8Q9P2G9 620 aaPredicted RBP11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 MAST3O60307 1309 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 EIF2AK4Q9P2K8 1649 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 TPST1O60507 370 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 PLA2G4BP0C869 781 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 CYP4A22Q5TCH4 519 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 FAM180AQ6UWF9 173 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 ZFYVE16Q7Z3T8 1539 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 TMEM110Q86TL2 294 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 NEU2Q9Y3R4 380 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 PTPREP23469 700 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 CASP5P51878 434 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 NEDD8Q15843 81 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 AKIRIN2Q53H80 203 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 SYCP2LQ5T4T6 812 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 ULK4Q96C45 1275 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 ATXN7L3BQ96GX2 97 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 MAGED4Q96JG8 741 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 PLEKHG4BQ96PX9 1271 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 BABAM1Q9NWV8 329 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 MRPL39Q9NYK5 338 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 MAD2L2Q9UI95 211 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 ADAM30Q9UKF2 790 aa11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 RBMX2Q9Y388 322 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-259ENST00000639406 PIPSLA2A3N6 862 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms