RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PPP2R5DQ14738 602 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 FAM187BQ17R55 369 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 GLRA4Q5JXX5 417 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 CDCA2Q69YH5 1023 aaPredicted RBP8.61□□□□□ -1.03
CLK1-215ENST00000621181 ANKS3Q6ZW76 656 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 RTL10Q7L3V2 364 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 WASF1Q92558 559 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 CLDN23Q96B33 292 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 MCRS1Q96EZ8 462 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 FAM126AQ9BYI3 521 aaPredicted RBP8.61□□□□□ -1.03
CLK1-215ENST00000621181 C2orf40Q9H1Z8 148 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 FZD8Q9H461 694 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 ORC3Q9UBD5 711 aaPredicted RBP8.61□□□□□ -1.03
CLK1-215ENST00000621181 MTRRQ9UBK8 725 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 RAB23Q9ULC3 237 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 NDRG2Q9UN36 371 aaKnown RBP8.61□□□□□ -1.03
CLK1-215ENST00000621181 NOTCH4Q99466 2003 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 PRRG1O14668 218 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 LRG1P02750 347 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 PRKCBP05771 671 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 ELF1P32519 619 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 CLCNKBP51801 687 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 MTAPQ13126 283 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 SLC5A9Q2M3M2 681 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 KLHL40Q2TBA0 621 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 DEPTORQ8TB45 409 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 TM6SF1Q9BZW5 370 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 CXCL16Q9H2A7 254 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 BRD9Q9H8M2 597 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 PRMT8Q9NR22 394 aaPredicted RBP8.61□□□□□ -1.03
CLK1-215ENST00000621181 USP20Q9Y2K6 914 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 DCDC2BA2VCK2 349 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 TMEM189-UBE2V1I3L0A0 370 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 ACKR2O00590 384 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 EPB41L2O43491 1005 aaKnown RBP8.6□□□□□ -1.03
CLK1-215ENST00000621181 TBC1D4O60343 1298 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 LILRB5O75023 590 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 KRT37O76014 449 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 FGFR3P22607 806 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 TKTP29401 623 aaKnown RBP8.6□□□□□ -1.03
CLK1-215ENST00000621181 NRLP54845 237 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 NUCB2P80303 420 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 PKP1Q13835 747 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 GRM2Q14416 872 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 NAB2Q15742 525 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 LPAL2Q16609 132 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 TANGO2Q6ICL3 276 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 ZNF461Q8TAF7 563 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 DNASE1L2Q92874 299 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 ELSPBP1Q96BH3 223 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 RTKNQ9BST9 563 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 PLA2G2FQ9BZM2 168 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 ZFP14Q9HCL3 533 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 TRIP11Q15643 1979 aa8.6□□□□□ -1.03
CLK1-215ENST00000621181 I3L4J1 428 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 MAN2B1O00754 1011 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 CEBPBP17676 345 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 PTPN2P17706 415 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 NAMPTP43490 491 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 ARPP19P56211 112 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 CUL4AQ13619 759 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 PPP2R5AQ15172 486 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 UPP1Q16831 310 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 DCAF4L1Q3SXM0 396 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 APBB1IPQ7Z5R6 666 aaPredicted RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 CATSPER3Q86XQ3 398 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 BSNDQ8WZ55 320 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 NELL1Q92832 810 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 TNFRSF25Q93038 417 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 UROC1Q96N76 676 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 CORO1BQ9BR76 489 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 TRMT61BQ9BVS5 477 aaKnown RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 GOLGA2P5Q9HBQ8 144 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 LMBRD1Q9NUN5 540 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 TPCN1Q9ULQ1 816 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 BACE2Q9Y5Z0 518 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 ARHGEF35A5YM69 484 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 BTBD18B2RXH4 712 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 ZNF197O14709 1029 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 PFKFB2O60825 505 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 HSP90AA1P07900 732 aaKnown RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 SPATA31C1P0DKV0 1188 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 ATF2P15336 505 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 IGFBP6P24592 240 aaPredicted RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 BRCC3P46736 316 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 YARSP54577 528 aaKnown RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 ANAPC15P60006 121 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 ROR1Q01973 937 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 FZD5Q13467 585 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 ATF7IP2Q5U623 682 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 EEF1DP3Q658K8 133 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 PADI6Q6TGC4 694 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 PRR23BQ6ZRT6 265 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 PDZD4Q76G19 769 aaPredicted RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 ELMOD1Q8N336 334 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 CELF5Q8N6W0 485 aaKnown RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 IRF7Q92985 503 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms