RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 FRMD5Q7Z6J6 570 aa15.31■□□□□ 0.04
CCND1-204ENST00000539241 ITFG1Q8TB96 612 aa15.31■□□□□ 0.04
CCND1-204ENST00000539241 FGF14Q92915 247 aa15.31■□□□□ 0.04
CCND1-204ENST00000539241 ZMAT2Q96NC0 199 aaKnown RBP15.31■□□□□ 0.04
CCND1-204ENST00000539241 ACAP3Q96P50 834 aa15.31■□□□□ 0.04
CCND1-204ENST00000539241 TCHPQ9BT92 498 aa15.31■□□□□ 0.04
CCND1-204ENST00000539241 RPP25Q9BUL9 199 aaKnown RBP15.31■□□□□ 0.04
CCND1-204ENST00000539241 ARHGEF3Q9NR81 526 aa15.31■□□□□ 0.04
CCND1-204ENST00000539241 SLC2A4RGQ9NR83 387 aa15.31■□□□□ 0.04
CCND1-204ENST00000539241 SFI1A8K8P3 1242 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 ABLIM1O14639 778 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 KCNE1P15382 129 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 ATP2C1P98194 919 aaPredicted RBP15.3■□□□□ 0.04
CCND1-204ENST00000539241 HYIQ5T013 277 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 MTSS1LQ765P7 747 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 DOCK8Q8NF50 2099 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 FGF13Q92913 245 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 ZNF396Q96N95 335 aaPredicted RBP15.3■□□□□ 0.04
CCND1-204ENST00000539241 HCFC1R1Q9NWW0 138 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 CNTN3Q9P232 1028 aa15.3■□□□□ 0.04
CCND1-204ENST00000539241 DNMT3BQ9UBC3 853 aaKnown RBP15.3■□□□□ 0.04
CCND1-204ENST00000539241 RIF1Q5UIP0 2472 aaKnown RBP15.29■□□□□ 0.04
CCND1-204ENST00000539241 PLS3P13797 630 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 RAD51AP2Q09MP3 1159 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 STRN3Q13033 797 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 SF3A1Q15459 793 aaKnown RBP15.29■□□□□ 0.04
CCND1-204ENST00000539241 PABPC1LQ4VXU2 614 aaKnown RBP15.29■□□□□ 0.04
CCND1-204ENST00000539241 VARS2Q5ST30 1063 aaKnown RBP15.29■□□□□ 0.04
CCND1-204ENST00000539241 ATL3Q6DD88 541 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 TMEM161BQ8NDZ6 487 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 SPIRE2Q8WWL2 714 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 NKD2Q969F2 451 aaPredicted RBP15.29■□□□□ 0.04
CCND1-204ENST00000539241 ZBTB45Q96K62 511 aaPredicted RBP15.29■□□□□ 0.04
CCND1-204ENST00000539241 PNMA5Q96PV4 448 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 NTPCRQ9BSD7 190 aaKnown RBP15.29■□□□□ 0.04
CCND1-204ENST00000539241 ANKFY1Q9P2R3 1169 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 ATP6V1DQ9Y5K8 247 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 TCHHQ07283 1943 aa15.29■□□□□ 0.04
CCND1-204ENST00000539241 MTCL1Q9Y4B5 1905 aaKnown RBP15.28■□□□□ 0.04
CCND1-204ENST00000539241 VWA3AA6NCI4 1184 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 SYN3O14994 580 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 TOM1L1O75674 476 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 DCNP07585 359 aaKnown RBP15.28■□□□□ 0.04
CCND1-204ENST00000539241 RPL9P32969 192 aaKnown RBP15.28■□□□□ 0.04
CCND1-204ENST00000539241 SMTNP53814 917 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 GPC5P78333 572 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 ROR1Q01973 937 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 NOLC1Q14978 699 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCND1-204ENST00000539241 ARL6IP4Q66PJ3 421 aaKnown RBP15.28■□□□□ 0.04
CCND1-204ENST00000539241 SLC8B1Q6J4K2 584 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 NPAS3Q8IXF0 933 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 KCTD17Q8N5Z5 321 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 SYT2Q8N9I0 419 aaPredicted RBP15.28■□□□□ 0.04
CCND1-204ENST00000539241 C18orf25Q96B23 403 aaPredicted RBP15.28■□□□□ 0.04
CCND1-204ENST00000539241 CDK5RAP3Q96JB5 506 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 USP28Q96RU2 1077 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 PLIN2Q99541 437 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 KCNG1Q9UIX4 513 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 NUB1Q9Y5A7 615 aa15.28■□□□□ 0.04
CCND1-204ENST00000539241 WDR27A2RRH5 827 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 H7C4K7 107 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 MEFVO15553 781 aaPredicted RBP15.27■□□□□ 0.04
CCND1-204ENST00000539241 RHOP08100 348 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 PLA2G4BP0C869 781 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 MAPTP10636 758 aaKnown RBP15.27■□□□□ 0.04
CCND1-204ENST00000539241 ELF1P32519 619 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 NASPP49321 788 aaPredicted RBP15.27■□□□□ 0.04
CCND1-204ENST00000539241 SLC12A3P55017 1021 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 PTPAQ15257 358 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 SPECC1Q5M775 1068 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 ING5Q8WYH8 240 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 KCND2Q9NZV8 630 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 CHMP5Q9NZZ3 219 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 MRPS23Q9Y3D9 190 aaKnown RBP15.27■□□□□ 0.04
CCND1-204ENST00000539241 SIT1Q9Y3P8 196 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 CLIC4Q9Y696 253 aa15.27■□□□□ 0.04
CCND1-204ENST00000539241 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.04
CCND1-204ENST00000539241 VWA8A3KMH1 1905 aa15.27■□□□□ 0.03
CCND1-204ENST00000539241 FAM186AA6NE01 2351 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 ARHGEF37A1IGU5 675 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 PRRG1O14668 218 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 TBC1D4O60343 1298 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 ABLIM3O94929 683 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 LRG1P02750 347 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 MCM4P33991 863 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 ARPP19P56211 112 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 STARD6P59095 220 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
CCND1-204ENST00000539241 MCL1Q07820 350 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 MRPL58Q14197 206 aaKnown RBP15.26■□□□□ 0.03
CCND1-204ENST00000539241 SLC10A6Q3KNW5 377 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 FOXD4L6Q3SYB3 417 aaPredicted RBP15.26■□□□□ 0.03
CCND1-204ENST00000539241 TMEM119Q4V9L6 283 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 SEZ6Q53EL9 994 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 FOXD4L3Q6VB84 417 aaPredicted RBP15.26■□□□□ 0.03
CCND1-204ENST00000539241 ZPBP2Q6X784 338 aa15.26■□□□□ 0.03
CCND1-204ENST00000539241 PJA1Q8NG27 643 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms