RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CDH22Q9UJ99 828 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 PCDHB13Q9Y5F0 798 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 TGM5O43548 720 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 DCXO43602 365 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 LRPAP1P30533 357 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 AMPD3Q01432 767 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 PPP2R3AQ06190 1150 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 PSMD5Q16401 504 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 ATAT1Q5SQI0 421 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 ZBTB41Q5SVQ8 909 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 RNF135Q8IUD6 432 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 MTRRQ9UBK8 725 aa18.73■□□□□ 0.59
SFSWAP-205ENST00000537164 LACTBL1A8MY62 500 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 GPR37L1O60883 481 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 IDEP14735 1019 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 RPL17P18621 184 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 ADSSP30520 456 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 CASP5P51878 434 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 KCNA1Q09470 495 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 POSTNQ15063 836 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 KANK3Q6NY19 840 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 TMC5Q6UXY8 1006 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 CEP57Q86XR8 500 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 CCDC65Q8IXS2 484 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 DHX58Q96C10 678 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 RPGRIP1Q96KN7 1286 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 ACCSQ96QU6 501 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 RPF1Q9H9Y2 349 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 C11orf16Q9NQ32 467 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 UBQLN1Q9UMX0 589 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 EXOC7Q9UPT5 735 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 USTQ9Y2C2 406 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 NR2E1Q9Y466 385 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 BACE2Q9Y5Z0 518 aa18.72■□□□□ 0.59
SFSWAP-205ENST00000537164 TISP43B9A030 160 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 SYN3O14994 580 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 POLR2DO15514 142 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 GCNT3O95395 438 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 TKTP29401 623 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 BRCC3P46736 316 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 RAB33AQ14088 237 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 ADALQ6DHV7 355 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 ANKS3Q6ZW76 656 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 PALB2Q86YC2 1186 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 FEZF2Q8TBJ5 459 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 STAMQ92783 540 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 SUSD3Q96L08 255 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 C7orf25Q9BPX7 421 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 PYM1Q9BRP8 204 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 FGFBP2Q9BYJ0 223 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 IKZF4Q9H2S9 585 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 ASB7Q9H672 318 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 ZDHHC7Q9NXF8 308 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 FAM13BQ9NYF5 915 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 TBC1D7Q9P0N9 293 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 TUBGCP4Q9UGJ1 667 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 FBXW11Q9UKB1 542 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 AGO2Q9UKV8 859 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 DERAQ9Y315 318 aa18.71■□□□□ 0.59
SFSWAP-205ENST00000537164 XPOTO43592 962 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 TBC1D4O60343 1298 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 MYBP10242 640 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 AARSP49588 968 aaKnown RBP eCLIP18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 KRT85P78386 507 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 EHHADHQ08426 723 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 MRPL58Q14197 206 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 SPATA1Q5VX52 437 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 CRELD2Q6UXH1 353 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 RTL10Q7L3V2 364 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 KREMEN2Q8NCW0 462 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 LEO1Q8WVC0 666 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 ZNF707Q96C28 371 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 KIF12Q96FN5 646 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 ATP6V1DQ9Y5K8 247 aa18.7■□□□□ 0.58
SFSWAP-205ENST00000537164 CCDC195A0A1B0GUA6 201 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 I3L4J1 428 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 ADAM12O43184 909 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 GARTP22102 1010 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 ACOT2P49753 483 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 SPAG1Q07617 926 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 BECN1Q14457 450 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 SLC8B1Q6J4K2 584 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 RSPO2Q6UXX9 243 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 GLYCTKQ8IVS8 523 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 POMGNT1Q8WZA1 660 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 TMEM206Q9H813 350 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 MUTYHQ9UIF7 546 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 KCNH3Q9ULD8 1083 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 C2CD2Q9Y426 696 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 NUB1Q9Y5A7 615 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 MYO10Q9HD67 2058 aa18.69■□□□□ 0.58
SFSWAP-205ENST00000537164 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 M0QZQ0 153 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 RFPL2O75678 378 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 ZMYND10O75800 440 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 SPATA31D3P0C874 917 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 PAX3P23760 479 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 CMA1P23946 247 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 HOXA9P31269 272 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms