RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 POLR3CQ9BUI4 534 aaPredicted RBP23.16■■□□□ 1.3
CHKA-206ENST00000531341 TBC1D4O60343 1298 aa23.15■■□□□ 1.3
CHKA-206ENST00000531341 ARPP19P56211 112 aa23.15■■□□□ 1.3
CHKA-206ENST00000531341 LPAL2Q16609 132 aa23.15■■□□□ 1.3
CHKA-206ENST00000531341 ATF7IP2Q5U623 682 aa23.15■■□□□ 1.3
CHKA-206ENST00000531341 GPR161Q8N6U8 529 aaKnown RBP23.15■■□□□ 1.3
CHKA-206ENST00000531341 ZMAT2Q96NC0 199 aaKnown RBP23.15■■□□□ 1.3
CHKA-206ENST00000531341 USP18Q9UMW8 372 aa23.15■■□□□ 1.3
CHKA-206ENST00000531341 ARHGEF35A5YM69 484 aa23.14■■□□□ 1.29
CHKA-206ENST00000531341 LRG1P02750 347 aa23.14■■□□□ 1.29
CHKA-206ENST00000531341 ALKAL1Q6UXT8 129 aa23.14■■□□□ 1.29
CHKA-206ENST00000531341 HS6ST3Q8IZP7 471 aa23.14■■□□□ 1.29
CHKA-206ENST00000531341 UROC1Q96N76 676 aa23.14■■□□□ 1.29
CHKA-206ENST00000531341 MRPS17Q9Y2R5 130 aaKnown RBP23.14■■□□□ 1.29
CHKA-206ENST00000531341 NCANO14594 1321 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 TRAPPC3O43617 180 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 MOSPD3O75425 235 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 ATF2P15336 505 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 RPA1P27694 616 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 OSTNP61366 133 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 XKR4Q5GH76 650 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 DNASE1L2Q92874 299 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 SECISBP2LQ93073 1101 aaKnown RBP23.13■■□□□ 1.29
CHKA-206ENST00000531341 GTF3C6Q969F1 213 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 ASB16Q96NS5 453 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 CHRDQ9H2X0 955 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 BRD9Q9H8M2 597 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 CYP4F11Q9HBI6 524 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 CDV3Q9UKY7 258 aaKnown RBP23.13■■□□□ 1.29
CHKA-206ENST00000531341 SPTBN2O15020 2390 aa23.13■■□□□ 1.29
CHKA-206ENST00000531341 PRR5-ARHGAP8B1AHC4 643 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 PODXLO00592 558 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 PRRG1O14668 218 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 MEFVO15553 781 aaPredicted RBP23.12■■□□□ 1.29
CHKA-206ENST00000531341 GJA1P17302 382 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 ELF1P32519 619 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 ARHGAP8P85298 464 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 LMNB2Q03252 620 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 SPEM2Q0P670 501 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 MRPL58Q14197 206 aaKnown RBP23.12■■□□□ 1.29
CHKA-206ENST00000531341 VITQ6UXI7 678 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 MAP4K3Q8IVH8 894 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 TRMT61BQ9BVS5 477 aaKnown RBP23.12■■□□□ 1.29
CHKA-206ENST00000531341 LMAN1LQ9HAT1 526 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 ZFP14Q9HCL3 533 aa23.12■■□□□ 1.29
CHKA-206ENST00000531341 ZNF334Q9HCZ1 680 aaPredicted RBP23.12■■□□□ 1.29
CHKA-206ENST00000531341 SDHBP21912 280 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 VIPR2P41587 438 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 GUCY1B3Q02153 619 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 GAS6Q14393 721 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 TCEAL8Q8IYN2 117 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 TMEM130Q8N3G9 435 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 C18orf25Q96B23 403 aaPredicted RBP23.11■■□□□ 1.29
CHKA-206ENST00000531341 CDT1Q9H211 546 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 PTPRHQ9HD43 1115 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 CEP72Q9P209 647 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 FBXL5Q9UKA1 691 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 TNFSF13BQ9Y275 285 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 INSL5Q9Y5Q6 135 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.11■■□□□ 1.29
CHKA-206ENST00000531341 CFAP47Q6ZTR5 3102 aa23.11■■□□□ 1.29
CHKA-206ENST00000531341 MAN2B1O00754 1011 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 GDI1P31150 447 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 GRM5P41594 1212 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 EFNA5P52803 228 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 PPP2R5AQ15172 486 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 ZNF174Q15697 407 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 TAS1R3Q7RTX0 852 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 FAM3CQ92520 227 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 IFT74Q96LB3 600 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 ACO2Q99798 780 aaKnown RBP23.1■■□□□ 1.29
CHKA-206ENST00000531341 RTKNQ9BST9 563 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 FAM126AQ9BYI3 521 aaPredicted RBP23.1■■□□□ 1.29
CHKA-206ENST00000531341 TRIP11Q15643 1979 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 COL4A2P08572 1712 aa23.1■■□□□ 1.29
CHKA-206ENST00000531341 K7ERI5 159 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 MICAL2O94851 1124 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 SATB1Q01826 763 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 DMWDQ09019 674 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 ST3GAL1Q11201 340 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 PDZD4Q76G19 769 aaPredicted RBP23.09■■□□□ 1.29
CHKA-206ENST00000531341 BHMT2Q9H2M3 363 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 GMEB2Q9UKD1 530 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 PIAS3Q9Y6X2 628 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 CACNA1BQ00975 2339 aa23.09■■□□□ 1.29
CHKA-206ENST00000531341 ZNF197O14709 1029 aa23.08■■□□□ 1.29
CHKA-206ENST00000531341 TWF1Q12792 350 aa23.08■■□□□ 1.29
CHKA-206ENST00000531341 ANKRD1Q15327 319 aa23.08■■□□□ 1.29
CHKA-206ENST00000531341 MAMSTRQ6ZN01 415 aa23.08■■□□□ 1.29
CHKA-206ENST00000531341 SMARCD2Q92925 531 aa23.08■■□□□ 1.29
CHKA-206ENST00000531341 IRF7Q92985 503 aa23.08■■□□□ 1.29
CHKA-206ENST00000531341 RSPRY1Q96DX4 576 aa23.08■■□□□ 1.29
CHKA-206ENST00000531341 TPRP12270 2363 aaKnown RBP23.07■■□□□ 1.28
CHKA-206ENST00000531341 SYN3O14994 580 aa23.07■■□□□ 1.28
CHKA-206ENST00000531341 OR52Z1P0C646 297 aa23.07■■□□□ 1.28
CHKA-206ENST00000531341 CHRNB1P11230 501 aa23.07■■□□□ 1.28
CHKA-206ENST00000531341 PSMC3P17980 439 aa23.07■■□□□ 1.28
CHKA-206ENST00000531341 CCNE1P24864 410 aa23.07■■□□□ 1.28
CHKA-206ENST00000531341 HOXC13P31276 330 aa23.07■■□□□ 1.28
CHKA-206ENST00000531341 YARSP54577 528 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms