RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 LIN9Q5TKA1 542 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
C11orf54-209ENST00000530620 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 FAM160A2Q8N612 972 aaPredicted RBP11.74□□□□□ -0.53
C11orf54-209ENST00000530620 ERMNQ8TAM6 284 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 NKD2Q969F2 451 aaPredicted RBP11.74□□□□□ -0.53
C11orf54-209ENST00000530620 C8orf76Q96K31 380 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 SNX27Q96L92 541 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
C11orf54-209ENST00000530620 ADPGKQ9BRR6 497 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.74□□□□□ -0.53
C11orf54-209ENST00000530620 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 NUMBLQ9Y6R0 609 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 COL4A2P08572 1712 aa11.74□□□□□ -0.53
C11orf54-209ENST00000530620 C8AP07357 584 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 RFX1P22670 979 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 FSHRP23945 695 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 IGFBP6P24592 240 aaPredicted RBP11.73□□□□□ -0.53
C11orf54-209ENST00000530620 ORC2Q13416 577 aaPredicted RBP11.73□□□□□ -0.53
C11orf54-209ENST00000530620 PPP2R5AQ15172 486 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 DCAF4L1Q3SXM0 396 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 TICRRQ7Z2Z1 1910 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 FGF14Q92915 247 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 NXPE3Q969Y0 559 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 ARHGEF3Q9NR81 526 aa11.73□□□□□ -0.53
C11orf54-209ENST00000530620 RNF223E7ERA6 249 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 CCL16O15467 120 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 HNRNPA1P09651 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
C11orf54-209ENST00000530620 CCT6AP40227 531 aaKnown RBP11.72□□□□□ -0.53
C11orf54-209ENST00000530620 ELAVL2Q12926 359 aaKnown RBP11.72□□□□□ -0.53
C11orf54-209ENST00000530620 SPECC1Q5M775 1068 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 PARM1Q6UWI2 310 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.72□□□□□ -0.53
C11orf54-209ENST00000530620 CEP120Q8N960 986 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 C3orf58Q8NDZ4 430 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 SLC7A14Q8TBB6 771 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 PPP1R10Q96QC0 940 aaKnown RBP11.72□□□□□ -0.53
C11orf54-209ENST00000530620 RPP25Q9BUL9 199 aaKnown RBP11.72□□□□□ -0.53
C11orf54-209ENST00000530620 BHMT2Q9H2M3 363 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
C11orf54-209ENST00000530620 GOLGA2P5Q9HBQ8 144 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 SLC2A4RGQ9NR83 387 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 HCFC1R1Q9NWW0 138 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 MTRRQ9UBK8 725 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 POLIQ9UNA4 740 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 TSC2P49815 1807 aa11.72□□□□□ -0.53
C11orf54-209ENST00000530620 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-209ENST00000530620 DMXL1Q9Y485 3027 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 DMDP11532 3685 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 PHLPP2Q6ZVD8 1323 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 TMEM189-UBE2V1I3L0A0 370 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 I3L4J1 428 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 DCNP07585 359 aaKnown RBP11.71□□□□□ -0.53
C11orf54-209ENST00000530620 MUTP22033 750 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 FGFR3P22607 806 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 TKTP29401 623 aaKnown RBP11.71□□□□□ -0.53
C11orf54-209ENST00000530620 HOXA9P31269 272 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 OR1D2P34982 312 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 RBM25P49756 843 aaKnown RBP11.71□□□□□ -0.53
C11orf54-209ENST00000530620 CLCNKBP51801 687 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 ATF7IP2Q5U623 682 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 PDXDC1Q6P996 788 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 DCLRE1AQ6PJP8 1040 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 CD300LGQ6UXG3 332 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 RSPO2Q6UXX9 243 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-209ENST00000530620 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 C4orf32Q8N8J7 132 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 FBXO18Q8NFZ0 1043 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 ITFG1Q8TB96 612 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 KIFAP3Q92845 792 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 FGF13Q92913 245 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 IFT74Q96LB3 600 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 FOXQ1Q9C009 403 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 DDX19AQ9NUU7 478 aaKnown RBP11.71□□□□□ -0.53
C11orf54-209ENST00000530620 PPP4R2Q9NY27 417 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 DLGAP2Q9P1A6 1054 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 CDH7Q9ULB5 785 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 LIMCH1Q9UPQ0 1083 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 CDY1Q9Y6F8 540 aa11.71□□□□□ -0.53
C11orf54-209ENST00000530620 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-209ENST00000530620 OTOGLQ3ZCN5 2332 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 FRYLO94915 3013 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 XYLBO75191 536 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 LRRN2O75325 713 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 B3GAT3O94766 335 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 BRCC3P46736 316 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 EFNA5P52803 228 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 GPC5P78333 572 aa11.7□□□□□ -0.54
C11orf54-209ENST00000530620 SOX4Q06945 474 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-209ENST00000530620 GNL2Q13823 731 aaKnown RBP11.7□□□□□ -0.54
C11orf54-209ENST00000530620 RAB33AQ14088 237 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms