RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 TRIM50Q86XT4 487 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 ZNF668Q96K58 619 aaPredicted RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 CALR3Q96L12 384 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 PCYT2Q99447 389 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.36□□□□□ -0.439e-6■■■■■ 27.7
USP35-207ENST00000530546 FAM153AQ9UHL3 310 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 CORO1CQ9ULV4 474 aaPredicted RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 SKAP2O75563 359 aaPredicted RBP12.35□□□□□ -0.43
USP35-207ENST00000530546 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
USP35-207ENST00000530546 GSTA1P08263 222 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 STAT5BP51692 787 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 PPATQ06203 517 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 PHLDB2Q86SQ0 1253 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 USP37Q86T82 979 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 ACTRT1Q8TDG2 376 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 ZNF516Q92618 1163 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 BTBD6Q96KE9 485 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 FBXL18Q96ME1 805 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 TXNRD2Q9NNW7 524 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 NOCTQ9UK39 431 aaKnown RBP12.35□□□□□ -0.43
USP35-207ENST00000530546 AGO2Q9UKV8 859 aaKnown RBP12.35□□□□□ -0.43
USP35-207ENST00000530546 FGGP02679 453 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 GARTP22102 1010 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 COPB2P35606 906 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 TCF7P36402 384 aaPredicted RBP12.35□□□□□ -0.43
USP35-207ENST00000530546 GPC3P51654 580 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP35-207ENST00000530546 SPRED3Q2MJR0 410 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 ACCSLQ4AC99 568 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 DDX42Q86XP3 938 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP35-207ENST00000530546 KIRREL3Q8IZU9 778 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 EIF1ADQ8N9N8 165 aaKnown RBP12.35□□□□□ -0.43
USP35-207ENST00000530546 SHC3Q92529 594 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 GLG1Q92896 1179 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 HES6Q96HZ4 224 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 PORCNQ9H237 461 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 DAAM1Q9Y4D1 1078 aa12.35□□□□□ -0.43
USP35-207ENST00000530546 EME2A4GXA9 379 aaPredicted RBP12.34□□□□□ -0.43
USP35-207ENST00000530546 SMNDC1O75940 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
USP35-207ENST00000530546 ATG7O95352 703 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 MYZAPP0CAP1 466 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 CYP11B1P15538 503 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 HSPA9P38646 679 aaKnown RBP12.34□□□□□ -0.43
USP35-207ENST00000530546 RTP1P59025 263 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 GPC5P78333 572 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 FMO1Q01740 532 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 Q3C1V9 767 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 AADACL2Q6P093 401 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 HAPLN2Q9GZV7 340 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 DHX33Q9H6R0 707 aaKnown RBP12.34□□□□□ -0.43
USP35-207ENST00000530546 ALG6Q9Y672 507 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 SART1O43290 800 aaKnown RBP12.34□□□□□ -0.43
USP35-207ENST00000530546 EXTL3O43909 919 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 ARIH2O95376 493 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 ZBTB48P10074 688 aaPredicted RBP12.34□□□□□ -0.43
USP35-207ENST00000530546 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
USP35-207ENST00000530546 PDE6CP51160 858 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 MYO1EQ12965 1108 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 CPNE8Q86YQ8 564 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 SCFD2Q8WU76 684 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 CDCA5Q96FF9 252 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 ISCUQ9H1K1 167 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 AMACRQ9UHK6 382 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 TMEM59LQ9UK28 342 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 COQ4Q9Y3A0 265 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 NR2E1Q9Y466 385 aa12.34□□□□□ -0.43
USP35-207ENST00000530546 A0A0G2JLL6 359 aaPredicted RBP12.33□□□□□ -0.43
USP35-207ENST00000530546 CFAP73A6NFT4 308 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 CES2O00748 559 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.43
USP35-207ENST00000530546 EDN1P05305 212 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 PDCD2Q16342 344 aaPredicted RBP12.33□□□□□ -0.43
USP35-207ENST00000530546 DCAF12L1Q5VU92 463 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 PRRT2Q7Z6L0 340 aaPredicted RBP12.33□□□□□ -0.43
USP35-207ENST00000530546 ZBTB33Q86T24 672 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 ERO1BQ86YB8 467 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 ZNF653Q96CK0 615 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 MSTO1Q9BUK6 570 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 CELF4Q9BZC1 486 aaKnown RBP12.33□□□□□ -0.43
USP35-207ENST00000530546 SPON1Q9HCB6 807 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 C1orf112Q9NSG2 853 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 BAIAP2L1Q9UHR4 511 aa12.33□□□□□ -0.43
USP35-207ENST00000530546 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 PTPRJQ12913 1337 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 H0YCG3 227 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 CNMDO75829 334 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 HPDP32754 393 aaPredicted RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 NAMPTP43490 491 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms