RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 H0YCG3 227 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 H7C4K7 107 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 SYN3O14994 580 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 CLDN3O15551 220 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 RFX1P22670 979 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 UBA7P41226 1012 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 NBL1P41271 181 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 NOLC1Q14978 699 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 SLC10A6Q3KNW5 377 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 TMEM119Q4V9L6 283 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 PABPC1LQ4VXU2 614 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 ARSHQ5FYA8 562 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 SLC8B1Q6J4K2 584 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 PARM1Q6UWI2 310 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 ITFG1Q8TB96 612 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 TBC1D17Q9HA65 648 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 HCFC1R1Q9NWW0 138 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 LARSQ9P2J5 1176 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 DNMT3BQ9UBC3 853 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 KCNH3Q9ULD8 1083 aa12.85□□□□□ -0.35
CTNNA1-237ENST00000523275 DOCK8Q8NF50 2099 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 PRRG1O14668 218 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 TBC1D4O60343 1298 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 ABLIM3O94929 683 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 BMP15O95972 392 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 CLTAP09496 248 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 ELF1P32519 619 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■□□□ 12.8
CTNNA1-237ENST00000523275 ARPP19P56211 112 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 GPC5P78333 572 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 ROR1Q01973 937 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 MCL1Q07820 350 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 MRPL58Q14197 206 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 SEZ6Q53EL9 994 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 PHLDB3Q6NSJ2 640 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 MTSS1LQ765P7 747 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 FGF14Q92915 247 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 CALML4Q96GE6 196 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 SUSD3Q96L08 255 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 ARHGEF3Q9NR81 526 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 ODF2LQ9ULJ1 636 aa12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 MRPS23Q9Y3D9 190 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-237ENST00000523275 PTPRZ1P23471 2315 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 LRG1P02750 347 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 ATF2P15336 505 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 PTPN2P17706 415 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 SCP2P22307 547 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 NCKAP1LP55160 1127 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 ANGPT1Q15389 498 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 KYAT1Q16773 422 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 CTXN3Q4LDR2 81 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 BRAPQ7Z569 592 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 FRMD5Q7Z6J6 570 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 GPBP1Q86WP2 473 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 TCEAL8Q8IYN2 117 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 APPL2Q8NEU8 664 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 KCNN1Q92952 543 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 BICD1Q96G01 975 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 SHDQ96IW2 340 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 REEP2Q9BRK0 252 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 FBXL5Q9UKA1 691 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 SIT1Q9Y3P8 196 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 VWA8A3KMH1 1905 aa12.83□□□□□ -0.36
CTNNA1-237ENST00000523275 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 TRIP11Q15643 1979 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 TTC26A0AVF1 554 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 WDR27A2RRH5 827 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 RHOP08100 348 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 CXCL8P10145 99 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 MARCKSP29966 332 aaPredicted RBP12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 MCM4P33991 863 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 TPGS2Q68CL5 300 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 ASCL5Q7RTU5 278 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 NPAS3Q8IXF0 933 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 MYCT1Q8N699 235 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 HAPLN2Q9GZV7 340 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 CYP4F11Q9HBI6 524 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 BLOC1S4Q9NUP1 217 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 GDE1Q9NZC3 331 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 TUBGCP4Q9UGJ1 667 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 TBX20Q9UMR3 447 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 DOCK6Q96HP0 2047 aa12.82□□□□□ -0.36
CTNNA1-237ENST00000523275 PRR23AA6NEV1 266 aa12.81□□□□□ -0.36
CTNNA1-237ENST00000523275 HNRNPDLO14979 420 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-237ENST00000523275 FAM13AO94988 1023 aa12.81□□□□□ -0.36
CTNNA1-237ENST00000523275 SEC24AO95486 1093 aa12.81□□□□□ -0.36
CTNNA1-237ENST00000523275 KRT18P05783 430 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms