RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TRIP12Q14669 1992 aaPredicted RBP18.08■□□□□ 0.48
SREK1-212ENST00000522912 ZRANB2O95218 330 aaKnown RBP eCLIP18.07■□□□□ 0.487e-7■■■□□ 18.1
SREK1-212ENST00000522912 SMIM10L2AP0DMW4 78 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 SMIM10L2BP0DMW5 78 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 MCF2P10911 925 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 TBXAS1P24557 533 aaPredicted RBP18.07■□□□□ 0.48
SREK1-212ENST00000522912 HADHBP55084 474 aaKnown RBP18.07■□□□□ 0.48
SREK1-212ENST00000522912 CLEC16AQ2KHT3 1053 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 CFAP221Q4G0U5 840 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 CC2D1AQ6P1N0 951 aaPredicted RBP18.07■□□□□ 0.48
SREK1-212ENST00000522912 TMCO3Q6UWJ1 677 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 RHOT2Q8IXI1 618 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 MMGT1Q8N4V1 131 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 UBR7Q8N806 425 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 TAF4BQ92750 862 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 APBA2Q99767 749 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 RPF1Q9H9Y2 349 aaKnown RBP18.07■□□□□ 0.48
SREK1-212ENST00000522912 RNF14Q9UBS8 474 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 CHORDC1Q9UHD1 332 aaPredicted RBP18.07■□□□□ 0.48
SREK1-212ENST00000522912 CNTN6Q9UQ52 1028 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 PCDHB4Q9Y5E5 795 aa18.07■□□□□ 0.48
SREK1-212ENST00000522912 KCNK3O14649 394 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 TNPO2O14787 897 aaKnown RBP18.06■□□□□ 0.48
SREK1-212ENST00000522912 STAG3L1P0CL83 205 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 VSNL1P62760 191 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 BRD3Q15059 726 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 ACAD10Q6JQN1 1059 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 CCDC151A5D8V7 595 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 CES2O00748 559 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 ATMINO43313 823 aaPredicted RBP18.06■□□□□ 0.48
SREK1-212ENST00000522912 TSPAN1O60635 241 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 CLSTN1O94985 981 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 IL18RAPO95256 599 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 TMEM191BP0C7N4 346 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 BPIFB4P59827 614 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 SREBF2Q12772 1141 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 HIC1Q14526 733 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 TMEM270Q6UE05 265 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 ZNF410Q86VK4 478 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 SOCS4Q8WXH5 440 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 CCDC102AQ96A19 550 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 HES6Q96HZ4 224 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 SCLT1Q96NL6 688 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 CCDC94Q9BW85 323 aaPredicted RBP18.06■□□□□ 0.48
SREK1-212ENST00000522912 IMPG2Q9BZV3 1241 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 ADAMTS10Q9H324 1103 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 CTTNBP2NLQ9P2B4 639 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 AMFRQ9UKV5 643 aa18.06■□□□□ 0.48
SREK1-212ENST00000522912 LACTBL1A8MY62 500 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 CYP1A2P05177 515 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 FGFR4P22455 802 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 TM4SF4P48230 202 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 TMEM62Q0P6H9 643 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 MFSD10Q14728 455 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 KIZQ2M2Z5 673 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 ZNF677Q86XU0 584 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 TMEM130Q8N3G9 435 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 RBBP8NLQ8NC74 664 aaPredicted RBP18.05■□□□□ 0.48
SREK1-212ENST00000522912 PBKQ96KB5 322 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 FAM49AQ9H0Q0 323 aaPredicted RBP18.05■□□□□ 0.48
SREK1-212ENST00000522912 RBM12Q9NTZ6 932 aaKnown RBP18.05■□□□□ 0.48
SREK1-212ENST00000522912 NRCAMQ92823 1304 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 TNNC2P02585 160 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 UNGP13051 313 aaPredicted RBP18.05■□□□□ 0.48
SREK1-212ENST00000522912 BEX3Q00994 111 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 TRPC3Q13507 836 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 SGSM1Q2NKQ1 1148 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 RUFY4Q6ZNE9 571 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 ANKRD36BP1Q96IX9 119 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 XYLT2Q9H1B5 865 aa18.05■□□□□ 0.48
SREK1-212ENST00000522912 ABT1Q9ULW3 272 aaKnown RBP18.05■□□□□ 0.48
SREK1-212ENST00000522912 CITO14578 2027 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 PCNTO95613 3336 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 MBLAC1A4D2B0 266 aaPredicted RBP18.04■□□□□ 0.48
SREK1-212ENST00000522912 HAS3O00219 553 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 GPR32O75388 356 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 MTA2O94776 668 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 CFHP08603 1231 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 NFICP08651 508 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 PSEN2P49810 448 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 ZNF132P52740 706 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 RNASE9P60153 205 aaKnown RBP18.04■□□□□ 0.48
SREK1-212ENST00000522912 WDR93Q6P2C0 686 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 ZNF653Q96CK0 615 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 CDHR5Q9HBB8 845 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 ARFGAP3Q9NP61 516 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 GTF3C4Q9UKN8 822 aa18.04■□□□□ 0.48
SREK1-212ENST00000522912 A0A1B0GUA9 196 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 TARSL2A2RTX5 802 aaKnown RBP18.03■□□□□ 0.48
SREK1-212ENST00000522912 DDX3YO15523 660 aaKnown RBP18.03■□□□□ 0.48
SREK1-212ENST00000522912 ERLIN2O94905 339 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 MYL3P08590 195 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 CPT1AP50416 773 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 ADAM17P78536 824 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 SLC10A6Q3KNW5 377 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 JADE1Q6IE81 842 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 LRRC1Q9BTT6 524 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 NIF3L1Q9GZT8 377 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 AP5M1Q9H0R1 490 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 SIX4Q9UIU6 781 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms