RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PDE11AQ9HCR9 933 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 CHST7Q9NS84 486 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.69□□□□□ -0.06
COL1A1-208ENST00000494334 IRAK3Q9Y616 596 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 MYO7AQ13402 2215 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 TRIP11Q15643 1979 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 C2orf71A6NGG8 1288 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 TULP1O00294 542 aaPredicted RBP14.68□□□□□ -0.06
COL1A1-208ENST00000494334 PER2O15055 1255 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 CALUO43852 315 aaPredicted RBP14.68□□□□□ -0.06
COL1A1-208ENST00000494334 EXOC3O60645 756 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 LILRB3O75022 631 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 BMP6P22004 513 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 GTF2F1P35269 517 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL1A1-208ENST00000494334 BRCC3P46736 316 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 HYAL1Q12794 435 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 MORC3Q14149 939 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 MYBPC2Q14324 1141 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 BMS1Q14692 1282 aaKnown RBP14.68□□□□□ -0.06
COL1A1-208ENST00000494334 SKIV2LQ15477 1246 aaKnown RBP14.68□□□□□ -0.06
COL1A1-208ENST00000494334 PTPN14Q15678 1187 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 KIAA0319Q5VV43 1072 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 RBM23Q86U06 439 aaKnown RBP14.68□□□□□ -0.06
COL1A1-208ENST00000494334 NT5DC4Q86YG4 428 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 ADSSL1Q8N142 457 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 GPT2Q8TD30 523 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 PPP2R3CQ969Q6 453 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 B3GALT6Q96L58 329 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 GTPBP4Q9BZE4 634 aaKnown RBP14.68□□□□□ -0.06
COL1A1-208ENST00000494334 CLSTN2Q9H4D0 955 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 IGFLR1Q9H665 355 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 KIAA1468Q9P260 1216 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 CITO14578 2027 aa14.68□□□□□ -0.06
COL1A1-208ENST00000494334 SF3B1O75533 1304 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL1A1-208ENST00000494334 BIN1O00499 593 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 NR3C1P04150 777 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 CA8P35219 290 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 NRIP1P48552 1158 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 DSG1Q02413 1049 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 ELAVL2Q12926 359 aaKnown RBP14.67□□□□□ -0.06
COL1A1-208ENST00000494334 NFIL3Q16649 462 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 USP41Q3LFD5 358 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 ZCWPW2Q504Y3 356 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 FAM171A1Q5VUB5 890 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 MFSD14AQ96MC6 490 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 TLE6Q9H808 572 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 PRDM6Q9NQX0 595 aa14.67□□□□□ -0.06
COL1A1-208ENST00000494334 MRPL17Q9NRX2 175 aaKnown RBP14.67□□□□□ -0.06
COL1A1-208ENST00000494334 SPTBN5Q9NRC6 3674 aaKnown RBP14.67□□□□□ -0.06
COL1A1-208ENST00000494334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.66□□□□□ -0.06
COL1A1-208ENST00000494334 ANO9A1A5B4 782 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 I3L4J1 428 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 PIRO00625 290 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 C2CD2LO14523 706 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 PPEF2O14830 753 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 TRAPPC3O43617 180 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 URODP06132 367 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
COL1A1-208ENST00000494334 GLUD2P49448 558 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 CASP4P49662 377 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 TFAMQ00059 246 aaKnown RBP14.66□□□□□ -0.06
COL1A1-208ENST00000494334 CYP24A1Q07973 514 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 PSMD6Q15008 389 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 SURF1Q15526 300 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 DUSP6Q16828 381 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 RTP2Q5QGT7 225 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 C9orf57Q5W0N0 161 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 LMBRD2Q68DH5 695 aaPredicted RBP14.66□□□□□ -0.06
COL1A1-208ENST00000494334 CENPPQ6IPU0 288 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 KIAA1841Q6NSI8 718 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 CEP57Q86XR8 500 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 CACTINQ8WUQ7 758 aaKnown RBP14.66□□□□□ -0.06
COL1A1-208ENST00000494334 FAM84AQ96KN4 292 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 TTPALQ9BTX7 342 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 GZF1Q9H116 711 aaPredicted RBP14.66□□□□□ -0.06
COL1A1-208ENST00000494334 NUP62CLQ9H1M0 184 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 DPP3Q9NY33 737 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 SSX2IPQ9Y2D8 614 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 NUB1Q9Y5A7 615 aa14.66□□□□□ -0.06
COL1A1-208ENST00000494334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.65□□□□□ -0.06
COL1A1-208ENST00000494334 PPP1R3GB7ZBB8 358 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 NCK2O43639 380 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 CNPP09543 421 aaKnown RBP14.65□□□□□ -0.06
COL1A1-208ENST00000494334 FGFR3P22607 806 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 NR2F2P24468 414 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 PMS1P54277 932 aaKnown RBP14.65□□□□□ -0.06
COL1A1-208ENST00000494334 ADAM9Q13443 819 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 ADAM15Q13444 863 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 COL19A1Q14993 1142 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 CTC1Q2NKJ3 1217 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 EDRF1Q3B7T1 1238 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 CEP135Q66GS9 1140 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 SCARA3Q6AZY7 606 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.65□□□□□ -0.06
COL1A1-208ENST00000494334 GPR65Q8IYL9 337 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 TRIML1Q8N9V2 468 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 OR5B17Q8NGF7 314 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 PLEKHO2Q8TD55 490 aa14.65□□□□□ -0.06
COL1A1-208ENST00000494334 RIN2Q8WYP3 895 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms