RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 RHOP08100 348 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 MCF2P10911 925 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 CEBPBP17676 345 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 PRPHP41219 470 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 GUCY2FP51841 1108 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 CDR1P51861 262 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 ARSHQ5FYA8 562 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 ZBTB41Q5SVQ8 909 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 PDXDC1Q6P996 788 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 ANKS3Q6ZW76 656 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 APBB1IPQ7Z5R6 666 aaPredicted RBP12.76□□□□□ -0.37
VARS2-208ENST00000477052 ADSSL1Q8N142 457 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 TMEM161BQ8NDZ6 487 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 NXPE3Q969Y0 559 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 SLC2A4RGQ9NR83 387 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 TOPORSQ9NS56 1045 aaPredicted RBP12.76□□□□□ -0.37
VARS2-208ENST00000477052 DLGAP2Q9P1A6 1054 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 MRPS23Q9Y3D9 190 aaKnown RBP12.76□□□□□ -0.37
VARS2-208ENST00000477052 SIT1Q9Y3P8 196 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
VARS2-208ENST00000477052 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
VARS2-208ENST00000477052 BACE2Q9Y5Z0 518 aa12.76□□□□□ -0.37
VARS2-208ENST00000477052 H3BQV1 296 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 LAD1O00515 517 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 PRRG1O14668 218 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 TRAPPC3O43617 180 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 CXCL8P10145 99 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 MAPTP10636 758 aaKnown RBP12.75□□□□□ -0.37
VARS2-208ENST00000477052 PLS3P13797 630 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 KCNE1P15382 129 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 GUCY2CP25092 1073 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 HOXA9P31269 272 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 TNFSF9P41273 254 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 MATR3P43243 847 aaKnown RBP eCLIP12.75□□□□□ -0.37
VARS2-208ENST00000477052 SLC12A3P55017 1021 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 GRIN1Q05586 938 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 WDR87Q6ZQQ6 2873 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 HS6ST3Q8IZP7 471 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 KCNG4Q8TDN1 519 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 CORO1BQ9BR76 489 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 CYP4F11Q9HBI6 524 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 CNTN3Q9P232 1028 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
VARS2-208ENST00000477052 TBC1D4O60343 1298 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 GJA1P17302 382 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 ELF1P32519 619 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 MCM4P33991 863 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 CCR2P41597 374 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 STRN3Q13033 797 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 NOLC1Q14978 699 aaKnown RBP eCLIP12.74□□□□□ -0.37
VARS2-208ENST00000477052 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 RABEP1Q15276 862 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 CTXN3Q4LDR2 81 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 TMEM119Q4V9L6 283 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 SLC44A4Q53GD3 710 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 RILPL1Q5EBL4 403 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 HYIQ5T013 277 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 TANGO2Q6ICL3 276 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 SLC8B1Q6J4K2 584 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 PHLDB3Q6NSJ2 640 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 GPIHBP1Q8IV16 184 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
VARS2-208ENST00000477052 PJA1Q8NG27 643 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 ZNF461Q8TAF7 563 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 CDK5RAP3Q96JB5 506 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 NTPCRQ9BSD7 190 aaKnown RBP12.74□□□□□ -0.37
VARS2-208ENST00000477052 SLC38A7Q9NVC3 462 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 CITO14578 2027 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 MYH11P35749 1972 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 SPTBN4Q9H254 2564 aa12.74□□□□□ -0.37
VARS2-208ENST00000477052 FAM186AA6NE01 2351 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 PPEF2O14830 753 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 CLDN3O15551 220 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 TOM1L1O75674 476 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 ABLIM3O94929 683 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 LRG1P02750 347 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 OR4Q2P0C623 313 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 ADCY1Q08828 1119 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 MRPL58Q14197 206 aaKnown RBP12.73□□□□□ -0.37
VARS2-208ENST00000477052 GRM2Q14416 872 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 MLF2Q15773 248 aaPredicted RBP12.73□□□□□ -0.37
VARS2-208ENST00000477052 RNF19BQ6ZMZ0 732 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 MTSS1LQ765P7 747 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 GPBP1Q86WP2 473 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 SPIRE2Q8WWL2 714 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 DDX12PQ92771 950 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 KIF12Q96FN5 646 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 BICD1Q96G01 975 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 SUSD3Q96L08 255 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 ZSWIM3Q96MP5 696 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 PGLYRP2Q96PD5 576 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 REEP2Q9BRK0 252 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 IKZF4Q9H2S9 585 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms