RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 LINC00301Q8NCQ3 95 aa12.78□□□□□ -0.36
SNU13-207ENST00000469522 UROC1Q96N76 676 aa12.78□□□□□ -0.36
SNU13-207ENST00000469522 PRKD2Q9BZL6 878 aa12.78□□□□□ -0.36
SNU13-207ENST00000469522 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
SNU13-207ENST00000469522 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
SNU13-207ENST00000469522 CLUHO75153 1309 aa12.78□□□□□ -0.36
SNU13-207ENST00000469522 A0A0B4J269 797 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 LACTBL1A8MY62 500 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 NRG2O14511 850 aaPredicted RBP12.77□□□□□ -0.37
SNU13-207ENST00000469522 PPEF2O14830 753 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 ABCD1P33897 745 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 OR1D2P34982 312 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 PLA2G5P39877 138 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 TXLNAP40222 546 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 CASP5P51878 434 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 VCPP55072 806 aaKnown RBP12.77□□□□□ -0.37
SNU13-207ENST00000469522 NTHL1P78549 312 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.37
SNU13-207ENST00000469522 RAB33AQ14088 237 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 MRPL58Q14197 206 aaKnown RBP12.77□□□□□ -0.37
SNU13-207ENST00000469522 IER5LQ5T953 404 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 DYMQ7RTS9 669 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 SFR1Q86XK3 245 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 ZSWIM2Q8NEG5 633 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 SMG7Q92540 1137 aaKnown RBP12.77□□□□□ -0.37
SNU13-207ENST00000469522 DDX12PQ92771 950 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 ST6GALNAC4Q9H4F1 302 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 ZDHHC7Q9NXF8 308 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 TFIP11Q9UBB9 837 aaKnown RBP12.77□□□□□ -0.37
SNU13-207ENST00000469522 STK17AQ9UEE5 414 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 SORCS3Q9UPU3 1222 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
SNU13-207ENST00000469522 BACE2Q9Y5Z0 518 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 CDY1Q9Y6F8 540 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 COL4A3Q01955 1670 aa12.77□□□□□ -0.37
SNU13-207ENST00000469522 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 HNRNPDLO14979 420 aaKnown RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 OGTO15294 1046 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 KRT18P05783 430 aaKnown RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 C8AP07357 584 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 CLTAP09496 248 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 ADSSP30520 456 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 LIG4P49917 911 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 WNT7BP56706 349 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 E2F4Q16254 413 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 FOXD4L5Q5VV16 416 aaPredicted RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 SLC8B1Q6J4K2 584 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 PDXDC1Q6P996 788 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 CRELD2Q6UXH1 353 aaPredicted RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 ZNF720Q7Z2F6 126 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 RSAD2Q8WXG1 361 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 PBXIP1Q96AQ6 731 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 ZHX3Q9H4I2 956 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 SLC38A7Q9NVC3 462 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 CPSF3Q9UKF6 684 aaKnown RBP12.76□□□□□ -0.37
SNU13-207ENST00000469522 HCN4Q9Y3Q4 1203 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 STYXL1Q9Y6J8 313 aa12.76□□□□□ -0.37
SNU13-207ENST00000469522 WDR27A2RRH5 827 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 NARSO43776 548 aaKnown RBP12.75□□□□□ -0.37
SNU13-207ENST00000469522 TBCAO75347 108 aaKnown RBP12.75□□□□□ -0.37
SNU13-207ENST00000469522 VNN2O95498 520 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 LRPAP1P30533 357 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
SNU13-207ENST00000469522 AARSP49588 968 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNU13-207ENST00000469522 ROR1Q01973 937 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 AXDND1Q5T1B0 1012 aaPredicted RBP12.75□□□□□ -0.37
SNU13-207ENST00000469522 RRAGBQ5VZM2 374 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 SCARA3Q6AZY7 606 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 CYP26C1Q6V0L0 522 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 OTOP3Q7RTS5 596 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 GLIS3Q8NEA6 775 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 PRSS33Q8NF86 280 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 BICD1Q96G01 975 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 PLEKHA5Q9HAU0 1116 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 KCNK12Q9HB15 430 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 HCFC1R1Q9NWW0 138 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 EPS15L1Q9UBC2 864 aa12.75□□□□□ -0.37
SNU13-207ENST00000469522 M0QZQ0 153 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 SPTLC1O15269 473 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 CCL16O15467 120 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 TRAPPC3O43617 180 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 ABLIM3O94929 683 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 SEC24AO95486 1093 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 NFICP08651 508 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 HOXA9P31269 272 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 ACOT2P49753 483 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 KYAT1Q16773 422 aa12.74□□□□□ -0.37
SNU13-207ENST00000469522 SHC4Q6S5L8 630 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms