RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.158e-7■■■■■ 99.3
PTMA-211ENST00000468027 PVALEFA0A1B0GWK0 134 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 TGFB1I1O43294 461 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 PRPF6O94906 941 aaKnown RBP14.14□□□□□ -0.15
PTMA-211ENST00000468027 URODP06132 367 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 CYP3A5P20815 502 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 RPL9P32969 192 aaKnown RBP14.14□□□□□ -0.15
PTMA-211ENST00000468027 ACOT2P49753 483 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 ZP2Q05996 745 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 SPAG1Q07617 926 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 BMS1Q14692 1282 aaKnown RBP14.14□□□□□ -0.15
PTMA-211ENST00000468027 SLFN12LQ6IEE8 588 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 EP400NLQ6ZTU2 488 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 PIK3R5Q8WYR1 880 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 CASP10Q92851 521 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 DDX27Q96GQ7 796 aaKnown RBP14.14□□□□□ -0.15
PTMA-211ENST00000468027 TSPAN18Q96SJ8 248 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 CLSTN3Q9BQT9 956 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
PTMA-211ENST00000468027 PRKAG3Q9UGI9 489 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 CDH22Q9UJ99 828 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 SSX2IPQ9Y2D8 614 aa14.14□□□□□ -0.15
PTMA-211ENST00000468027 USP15Q9Y4E8 981 aaPredicted RBP14.14□□□□□ -0.15
PTMA-211ENST00000468027 PODXLO00592 558 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 C2CD2LO14523 706 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 EIF3DO15371 548 aaKnown RBP eCLIP14.13□□□□□ -0.154e-43■□□□□ 8.7
PTMA-211ENST00000468027 TBC1D4O60343 1298 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 HOXB8P17481 243 aaPredicted RBP14.13□□□□□ -0.15
PTMA-211ENST00000468027 GARTP22102 1010 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 AFMP43652 599 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 BRCC3P46736 316 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 AARSP49588 968 aaKnown RBP eCLIP14.13□□□□□ -0.151e-25■□□□□ 8.5
PTMA-211ENST00000468027 ASIC1P78348 528 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 MRPL58Q14197 206 aaKnown RBP14.13□□□□□ -0.15
PTMA-211ENST00000468027 BMT2Q1RMZ1 405 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 FAM26FQ5R3K3 315 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 FAM171A1Q5VUB5 890 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 SPATA1Q5VX52 437 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 KANK3Q6NY19 840 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 PRSS55Q6UWB4 352 aaPredicted RBP14.13□□□□□ -0.15
PTMA-211ENST00000468027 RSPO2Q6UXX9 243 aaPredicted RBP14.13□□□□□ -0.15
PTMA-211ENST00000468027 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.13□□□□□ -0.15
PTMA-211ENST00000468027 PPFIBP1Q86W92 1011 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 SCFD1Q8WVM8 642 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 RIN2Q8WYP3 895 aaPredicted RBP14.13□□□□□ -0.15
PTMA-211ENST00000468027 KHSRPQ92945 711 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTMA-211ENST00000468027 TTPALQ9BTX7 342 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 EMILIN2Q9BXX0 1053 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 USP25Q9UHP3 1055 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 GREB1Q4ZG55 1949 aa14.13□□□□□ -0.15
PTMA-211ENST00000468027 OBSL1O75147 1896 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 ANO9A1A5B4 782 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 I3L4J1 428 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 TNFRSF10AO00220 468 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 ADAM12O43184 909 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 B3GAT3O94766 335 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 RPL17P18621 184 aaKnown RBP14.12□□□□□ -0.15
PTMA-211ENST00000468027 MATR3P43243 847 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTMA-211ENST00000468027 PPP2R3AQ06190 1150 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 ELAVL2Q12926 359 aaKnown RBP14.12□□□□□ -0.15
PTMA-211ENST00000468027 POSTNQ15063 836 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 JADE1Q6IE81 842 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 ADHFE1Q8IWW8 467 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 CD302Q8IX05 232 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 EFCAB13Q8IY85 973 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 ENGASEQ8NFI3 743 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 CXorf38Q8TB03 319 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 POMGNT1Q8WZA1 660 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 FBXL18Q96ME1 805 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 CBWD1Q9BRT8 395 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 ADAM7Q9H2U9 754 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 ASB7Q9H672 318 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 TMEM206Q9H813 350 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 RPF1Q9H9Y2 349 aaKnown RBP14.12□□□□□ -0.15
PTMA-211ENST00000468027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.12□□□□□ -0.153e-10■□□□□ 9.9
PTMA-211ENST00000468027 EXOC7Q9UPT5 735 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 DERAQ9Y315 318 aa14.12□□□□□ -0.15
PTMA-211ENST00000468027 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 M0QZQ0 153 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 PIRO00625 290 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 PPEF2O14830 753 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 TGM5O43548 720 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 NFICP08651 508 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 KLRC2P26717 231 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 TKTP29401 623 aaKnown RBP14.11□□□□□ -0.15
PTMA-211ENST00000468027 SYKP43405 635 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 GUCY2FP51841 1108 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 STK4Q13043 487 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 SNW1Q13573 536 aaKnown RBP14.11□□□□□ -0.15
PTMA-211ENST00000468027 CBX2Q14781 532 aaPredicted RBP14.11□□□□□ -0.15
PTMA-211ENST00000468027 SCARA3Q6AZY7 606 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 CEP57L1Q8IYX8 460 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 FMR1NBQ8N0W7 255 aaPredicted RBP14.11□□□□□ -0.15
PTMA-211ENST00000468027 C12orf76Q8N812 135 aaPredicted RBP14.11□□□□□ -0.15
PTMA-211ENST00000468027 FSIP1Q8NA03 581 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 KIAA0895Q8NCT3 520 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 HDAC7Q8WUI4 952 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 KIF12Q96FN5 646 aa14.11□□□□□ -0.15
PTMA-211ENST00000468027 SUSD3Q96L08 255 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms