RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	KCNN1	Q92952	543 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	ACO2	Q99798	780 aa	Known RBP	13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	CCDC94	Q9BW85	323 aa	Predicted RBP	13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	BLZF1	Q9H2G9	400 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	CACNG4	Q9UBN1	327 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	LIMD1	Q9UGP4	676 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	SERTAD1	Q9UHV2	236 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	FBXW11	Q9UKB1	542 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	DOCK6	Q96HP0	2047 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	WDFY4	Q6ZS81	3184 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	CCDC195	A0A1B0GUA6	201 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	SPDYE4	A6NLX3	237 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	ABLIM1	O14639	778 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	N4BP1	O75113	896 aa	Known RBP	13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	TADA2A	O75478	443 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	RFPL2	O75678	378 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	PROZ	P22891	400 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	AVPR2	P30518	371 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	GRM5	P41594	1212 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	SYK	P43405	635 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	ZNF131	P52739	623 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.87	□□□□□ -0.19	5e-6	■□□□□ 8.1
FDPS-204	ENST00000461507	E2F4	Q16254	413 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	ADAL	Q6DHV7	355 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	MPZL3	Q6UWV2	235 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	GRAMD1C	Q8IYS0	662 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	SYCP3	Q8IZU3	236 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	TTPAL	Q9BTX7	342 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	CDT1	Q9H211	546 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	SMOC2	Q9H3U7	446 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	MAGEF1	Q9HAY2	307 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	IGSF9	Q9P2J2	1179 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	EPS15L1	Q9UBC2	864 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	TBX20	Q9UMR3	447 aa		13.87	□□□□□ -0.19
FDPS-204	ENST00000461507	CLDN3	O15551	220 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	ZMYND10	O75800	440 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	POU2F2	P09086	479 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	FGFR3	P22607	806 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	CASP1	P29466	404 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	PSMD5	Q16401	504 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	SEZ6	Q53EL9	994 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	GLRA4	Q5JXX5	417 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	PDXDC1	Q6P996	788 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	CD300LG	Q6UXG3	332 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	ALKAL1	Q6UXT8	129 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	CEP120	Q8N960	986 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	LNX1	Q8TBB1	728 aa	Predicted RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	SMG7	Q92540	1137 aa	Known RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	RABGGTA	Q92696	567 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	ZBTB45	Q96K62	511 aa	Predicted RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	UROC1	Q96N76	676 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	CLSTN3	Q9BQT9	956 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	NTPCR	Q9BSD7	190 aa	Known RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	PRKD2	Q9BZL6	878 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	SEL1L	Q9UBV2	794 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	DUSP12	Q9UNI6	340 aa		13.86	□□□□□ -0.19
FDPS-204	ENST00000461507	NOTCH4	Q99466	2003 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	TOM1L1	O75674	476 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	MYB	P10242	640 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	MCF2	P10911	925 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	RPL17	P18621	184 aa	Known RBP	13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	CMA1	P23946	247 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	HOXA9	P31269	272 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	ABCD1	P33897	745 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	MRE11	P49959	708 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	NDUFA8	P51970	172 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	TDG	Q13569	410 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	FAM171A1	Q5VUB5	890 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	STXBP4	Q6ZWJ1	553 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	ALYREF	Q86V81	257 aa	Known RBP	13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	PALB2	Q86YC2	1186 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	HASPIN	Q8TF76	798 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	DNAJC19	Q96DA6	116 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	FAM212A	Q96EL1	285 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	SNX27	Q96L92	541 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	TRIM9	Q9C026	710 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	KCNK12	Q9HB15	430 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	CHMP5	Q9NZZ3	219 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	EXOC7	Q9UPT5	735 aa		13.85	□□□□□ -0.19
FDPS-204	ENST00000461507	SMIM28	A0A1B0GU29	152 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	KCNE1	P15382	129 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	UPP1	Q16831	310 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	DCLRE1A	Q6PJP8	1040 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	ZPBP2	Q6X784	338 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	HPS3	Q969F9	1004 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	NXPE3	Q969Y0	559 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	CCDC34	Q96HJ3	373 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	ACAP3	Q96P50	834 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	ACCS	Q96QU6	501 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	MYADM	Q96S97	322 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	MSTO1	Q9BUK6	570 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	GOLPH3L	Q9H4A5	285 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	KBTBD4	Q9NVX7	518 aa		13.84	□□□□□ -0.19
FDPS-204	ENST00000461507	MTRR	Q9UBK8	725 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms