RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 COLEC11Q9BWP8 271 aa19.23■□□□□ 0.67
CCDC188-201ENST00000439765 TMEM206Q9H813 350 aa19.23■□□□□ 0.67
CCDC188-201ENST00000439765 RPF1Q9H9Y2 349 aaKnown RBP19.23■□□□□ 0.67
CCDC188-201ENST00000439765 ADAM28Q9UKQ2 775 aa19.23■□□□□ 0.67
CCDC188-201ENST00000439765 USP15Q9Y4E8 981 aaPredicted RBP19.23■□□□□ 0.67
CCDC188-201ENST00000439765 STYXL1Q9Y6J8 313 aa19.23■□□□□ 0.67
CCDC188-201ENST00000439765 MTCL1Q9Y4B5 1905 aaKnown RBP19.23■□□□□ 0.67
CCDC188-201ENST00000439765 PRR33A8MZF0 331 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 SRGAP2BP0DMP2 458 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 HOXD13P35453 343 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 CLCNKBP51801 687 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 POSTNQ15063 836 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 KMT5BQ4FZB7 885 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 EPM2AIP1Q7L775 607 aaPredicted RBP19.22■□□□□ 0.67
CCDC188-201ENST00000439765 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 NOC3LQ8WTT2 800 aaKnown RBP19.22■□□□□ 0.67
CCDC188-201ENST00000439765 SAAL1Q96ER3 474 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 B3GALT6Q96L58 329 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 CBWD1Q9BRT8 395 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 SLC38A7Q9NVC3 462 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 CPSF3Q9UKF6 684 aaKnown RBP19.22■□□□□ 0.67
CCDC188-201ENST00000439765 ARIH1Q9Y4X5 557 aaPredicted RBP19.22■□□□□ 0.67
CCDC188-201ENST00000439765 DENND4AQ7Z401 1863 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 ZDBF2Q9HCK1 2354 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 TTC26A0AVF1 554 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 FAM86C2PA6NEL3 165 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 C2CD2LO14523 706 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 TADA2AO75478 443 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 MYL1P05976 194 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 CTSAP10619 480 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 PNOCQ13519 176 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 KYAT1Q16773 422 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 FUT10Q6P4F1 479 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 TMEM130Q8N3G9 435 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 MRPL43Q8N983 215 aaKnown RBP19.22■□□□□ 0.67
CCDC188-201ENST00000439765 ZSWIM2Q8NEG5 633 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 SCFD1Q8WVM8 642 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 SUSD6Q92537 303 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 KIF12Q96FN5 646 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 HERC2P3Q9BVR0 1158 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 TUBGCP4Q9UGJ1 667 aa19.22■□□□□ 0.67
CCDC188-201ENST00000439765 SF3B1O75533 1304 aaKnown RBP eCLIP19.21■□□□□ 0.67
CCDC188-201ENST00000439765 UBE4BO95155 1302 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 C2orf16Q68DN1 1984 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 C2orf71A6NGG8 1288 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 LACTBL1A8MY62 500 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 TULP1O00294 542 aaPredicted RBP19.21■□□□□ 0.67
CCDC188-201ENST00000439765 SOD2P04179 222 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 RPN1P04843 607 aaKnown RBP19.21■□□□□ 0.67
CCDC188-201ENST00000439765 URODP06132 367 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 BMS1Q14692 1282 aaKnown RBP19.21■□□□□ 0.67
CCDC188-201ENST00000439765 ARMCX5Q6P1M9 558 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 TAS1R1Q7RTX1 841 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 KIAA0895Q8NCT3 520 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 C3orf58Q8NDZ4 430 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 FAM213AQ9BRX8 229 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 GPR62Q9BZJ7 368 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 IRAK3Q9Y616 596 aa19.21■□□□□ 0.67
CCDC188-201ENST00000439765 B3GAT3O94766 335 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 CXCL14O95715 111 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 IGFBP6P24592 240 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-201ENST00000439765 DPYDQ12882 1025 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 STK4Q13043 487 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 CBX2Q14781 532 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-201ENST00000439765 PTPN14Q15678 1187 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 UPP1Q16831 310 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 ANKRD54Q6NXT1 300 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 RBM43Q6ZSC3 357 aaKnown RBP19.2■□□□□ 0.66
CCDC188-201ENST00000439765 RNF168Q8IYW5 571 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-201ENST00000439765 PHF7Q9BWX1 381 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-201ENST00000439765 PCIF1Q9H4Z3 704 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 PLEKHA5Q9HAU0 1116 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 STK39Q9UEW8 545 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 HCN4Q9Y3Q4 1203 aa19.2■□□□□ 0.66
CCDC188-201ENST00000439765 TSC2P49815 1807 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 GOLGA8IPA6NC78 632 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 GOLGA8JA6NMD2 632 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 LOC730098B7Z3J9 87 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 EFEMP2O95967 443 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 NFICP08651 508 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 HOXB8P17481 243 aaPredicted RBP19.19■□□□□ 0.66
CCDC188-201ENST00000439765 GARTP22102 1010 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 GLUD2P49448 558 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 GUCY2FP51841 1108 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 JADE1Q6IE81 842 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 LLGL2Q6P1M3 1020 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 CRELD2Q6UXH1 353 aaPredicted RBP19.19■□□□□ 0.66
CCDC188-201ENST00000439765 RNF135Q8IUD6 432 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 ZNF507Q8TCN5 953 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 ERCC4Q92889 916 aaPredicted RBP19.19■□□□□ 0.66
CCDC188-201ENST00000439765 UROC1Q96N76 676 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 S1PR5Q9H228 398 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 KIAA1468Q9P260 1216 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 HCFC2Q9Y5Z7 792 aa19.19■□□□□ 0.66
CCDC188-201ENST00000439765 PODXLO00592 558 aa19.18■□□□□ 0.66
CCDC188-201ENST00000439765 LETM1O95202 739 aaPredicted RBP19.18■□□□□ 0.66
CCDC188-201ENST00000439765 BMT2Q1RMZ1 405 aa19.18■□□□□ 0.66
CCDC188-201ENST00000439765 KIAA1841Q6NSI8 718 aa19.18■□□□□ 0.66
CCDC188-201ENST00000439765 SPATA20Q8TB22 786 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms