RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 ERCC5P28715 1186 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 SYKP43405 635 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 RARRES1P49788 294 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 CDK7P50613 346 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 NPEPPSP55786 919 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 ATP11AP98196 1134 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TLE2Q04725 743 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 EHHADHQ08426 723 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 GRB10Q13322 594 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TCEAL1Q15170 157 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 LRRC26Q2I0M4 334 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TMEM119Q4V9L6 283 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 RESP18Q5W5W9 173 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 CEP135Q66GS9 1140 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 EFCAB12Q6NXP0 572 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TAF2Q6P1X5 1199 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 USP49Q70CQ1 688 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 ANO5Q75V66 913 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 SV2BQ7L1I2 683 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 UBE2Q1Q7Z7E8 422 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 LCA5Q86VQ0 697 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 FAM126BQ8IXS8 530 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 IL22RA1Q8N6P7 574 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 PAF1Q8N7H5 531 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 SLC43A3Q8NBI5 491 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 MCPH1Q8NEM0 835 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 LMBR1Q8WVP7 490 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TRAPPC12Q8WVT3 735 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 LARP4BQ92615 738 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 RAD54LQ92698 747 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 SCLT1Q96NL6 688 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TOX2Q96NM4 488 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 SH2D3AQ9BRG2 576 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 BHMT2Q9H2M3 363 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 CUEDC2Q9H467 287 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 ATP6V0A4Q9HBG4 840 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 PRDM5Q9NQX1 630 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TRMT13Q9NUP7 481 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TMEM39AQ9NV64 488 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 UTP6Q9NYH9 597 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 WRAP73Q9P2S5 460 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 USP25Q9UHP3 1055 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 HOOK1Q9UJC3 728 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 KCNH3Q9ULD8 1083 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 AKT3Q9Y243 479 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 PCDHA2Q9Y5H9 948 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 NR2E3Q9Y5X4 410 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 GRIN2DO15399 1336 aa6.77□□□□□ -1.32
ECHDC1-208ENST00000436638 SMIM35A0A1B0GVV1 85 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 TMEM150BA6NC51 233 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 SOWAHDA6NJG2 315 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 POLR2DO15514 142 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 B4GALT4O60513 344 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 TBCAO75347 108 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 SMNDC1O75940 238 aaKnown RBP eCLIP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 MTA2O94776 668 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 STBD1O95210 358 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 SETSIPP0DME0 302 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 RAG1P15918 1043 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 PFKFB1P16118 471 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 CYP11B2P19099 503 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 ABCD1P33897 745 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 THPOP40225 353 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 UBE2HP62256 183 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 ZNF200P98182 395 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 CDC42EP1Q00587 391 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 TFDP1Q14186 410 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 EMC2Q15006 297 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 SNX17Q15036 470 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 TARBP2Q15633 366 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 FAM102BQ5T8I3 360 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 CCDC70Q6NSX1 233 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 CLEC17AQ6ZS10 378 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 MAEAQ7L5Y9 396 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 ANKRD33Q7Z3H0 272 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 GPBP1Q86WP2 473 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 C7orf61Q8IZ16 206 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 FMR1NBQ8N0W7 255 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 LRRC71Q8N4P6 559 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 SYT2Q8N9I0 419 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 TMEM87AQ8NBN3 555 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 CNNM3Q8NE01 707 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 SVIPQ8NHG7 77 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 CAGE1Q8TC20 777 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 PSPC1Q8WXF1 523 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 IFT74Q96LB3 600 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 TIPINQ9BVW5 301 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 FAM49AQ9H0Q0 323 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 TRPV6Q9H1D0 765 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 RASSF4Q9H2L5 321 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 MAGEF1Q9HAY2 307 aa6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 SUCLA2Q9P2R7 463 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 MYH9P35579 1960 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-208ENST00000436638 MBLAC1A4D2B0 266 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-208ENST00000436638 KLHL33A6NCF5 533 aa6.76□□□□□ -1.33
ECHDC1-208ENST00000436638 ASAP2O43150 1006 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms