RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 LIN9Q5TKA1 542 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 OTOP3Q7RTS5 596 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 SMG7Q92540 1137 aaKnown RBP16.68■□□□□ 0.26
NUP50-204ENST00000417702 EDAQ92838 391 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 ACSF2Q96CM8 615 aaPredicted RBP16.68■□□□□ 0.26
NUP50-204ENST00000417702 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 RHOBTB2Q9BYZ6 727 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 PIDD1Q9HB75 910 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 PANK4Q9NVE7 773 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 TBC1D7Q9P0N9 293 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 UBQLN1Q9UMX0 589 aaKnown RBP16.68■□□□□ 0.26
NUP50-204ENST00000417702 LACTBL1A8MY62 500 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 SYN3O14994 580 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 MCM4P33991 863 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 ME1P48163 572 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 ZXDAP98168 799 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 AMPD3Q01432 767 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 SPAG1Q07617 926 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 ALCAMQ13740 583 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 PKP1Q13835 747 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 POSTNQ15063 836 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 ENOX2Q16206 610 aaKnown RBP16.67■□□□□ 0.26
NUP50-204ENST00000417702 ZBTB41Q5SVQ8 909 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 ADALQ6DHV7 355 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 SLC39A4Q6P5W5 647 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 CD302Q8IX05 232 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 STAMQ92783 540 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 DHX58Q96C10 678 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 FAM212AQ96EL1 285 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 ACCSQ96QU6 501 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 TNMDQ9H2S6 317 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 TUBGCP4Q9UGJ1 667 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 FBXW11Q9UKB1 542 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 PCDHB13Q9Y5F0 798 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 BACE2Q9Y5Z0 518 aa16.67■□□□□ 0.26
NUP50-204ENST00000417702 ANKRD63C9JTQ0 380 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 FAM189A1O60320 539 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 ZMYND10O75800 440 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 PPP1R37O75864 691 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 GCNT3O95395 438 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 CYP3A5P20815 502 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 OR1D2P34982 312 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 RAB33AQ14088 237 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 PTPN21Q16825 1174 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 SHC4Q6S5L8 630 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 ZDHHC14Q8IZN3 488 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 FEZF2Q8TBJ5 459 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 POMGNT1Q8WZA1 660 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 PRKD2Q9BZL6 878 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 WDR6Q9NNW5 1121 aaKnown RBP16.66■□□□□ 0.26
NUP50-204ENST00000417702 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 CPSF3Q9UKF6 684 aaKnown RBP16.66■□□□□ 0.26
NUP50-204ENST00000417702 AGO2Q9UKV8 859 aaKnown RBP16.66■□□□□ 0.26
NUP50-204ENST00000417702 CDY1Q9Y6F8 540 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 STYXL1Q9Y6J8 313 aa16.66■□□□□ 0.26
NUP50-204ENST00000417702 PLXNA3P51805 1871 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 MYO10Q9HD67 2058 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 MYH15Q9Y2K3 1946 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 FRMD3A2A2Y4 597 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 H7C4K7 107 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 ADAM12O43184 909 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 LRPAP1P30533 357 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 DNM1Q05193 864 aaKnown RBP16.65■□□□□ 0.26
NUP50-204ENST00000417702 BECN1Q14457 450 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 ZBTB6Q15916 424 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 E2F4Q16254 413 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
NUP50-204ENST00000417702 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
NUP50-204ENST00000417702 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
NUP50-204ENST00000417702 STXBP4Q6ZWJ1 553 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 SYCP3Q8IZU3 236 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 APPL2Q8NEU8 664 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 ZNF707Q96C28 371 aaPredicted RBP16.65■□□□□ 0.26
NUP50-204ENST00000417702 SUSD3Q96L08 255 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 STRA6Q9BX79 667 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 KBTBD4Q9NVX7 518 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 LIMD1Q9UGP4 676 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 PCDHA7Q9UN72 937 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 HCN4Q9Y3Q4 1203 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 TECTAO75443 2155 aa16.65■□□□□ 0.26
NUP50-204ENST00000417702 VWA8A3KMH1 1905 aa16.64■□□□□ 0.26
NUP50-204ENST00000417702 MTCL1Q9Y4B5 1905 aaKnown RBP16.64■□□□□ 0.26
NUP50-204ENST00000417702 TISP43B9A030 160 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 PAPLNO95428 1278 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 C8AP07357 584 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 ADRB2P07550 413 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 HNRNPA1P09651 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
NUP50-204ENST00000417702 ACOT2P49753 483 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
NUP50-204ENST00000417702 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 JADE1Q6IE81 842 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 TRIM67Q6ZTA4 783 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 ASB7Q9H672 318 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms