RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 LIN9Q5TKA1 542 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 SV2BQ7L1I2 683 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 FBXL6Q8N531 539 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 CEP120Q8N960 986 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 SMG7Q92540 1137 aaKnown RBP15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 HVCN1Q96D96 273 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 EPSTI1Q96J88 318 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 ZBTB45Q96K62 511 aaPredicted RBP15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 B3GALT6Q96L58 329 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 LRRC27Q9C0I9 530 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 CXCL16Q9H2A7 254 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 ANKFY1Q9P2R3 1169 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 MTRRQ9UBK8 725 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 FBXW11Q9UKB1 542 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 NPHP3-ACAD11A0A0J9YXS1 232 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 PODXLO00592 558 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 HNRNPDLO14979 420 aaKnown RBP15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 OGTO15294 1046 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 XYLBO75191 536 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 ADRB2P07550 413 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 MARCKSP29966 332 aaPredicted RBP15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 GRIN1Q05586 938 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 PRSS55Q6UWB4 352 aaPredicted RBP15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 APPL2Q8NEU8 664 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 ZNF461Q8TAF7 563 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 HASPINQ8TF76 798 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 ZNF707Q96C28 371 aaPredicted RBP15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 ZMAT2Q96NC0 199 aaKnown RBP15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 EPS15L1Q9UBC2 864 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 NUB1Q9Y5A7 615 aa15.85■□□□□ 0.13
NIF3L1-205ENST00000409588 A0A0B4J269 797 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 K7ENM7 598 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 SPATA31D3P0C874 917 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 GAP43P17677 238 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 RPL17P18621 184 aaKnown RBP15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 OR1D2P34982 312 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 NASPP49321 788 aaPredicted RBP15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 TDGQ13569 410 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 POSTNQ15063 836 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 PPM1LQ5SGD2 360 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 ATL3Q6DD88 541 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 SLC8B1Q6J4K2 584 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 CD300LGQ6UXG3 332 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 SPATA31D4Q6ZUB0 917 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 ZNF720Q7Z2F6 126 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 ASIC4Q96FT7 647 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 IRF2BPLQ9H1B7 796 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 RPF1Q9H9Y2 349 aaKnown RBP15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 CACNG4Q9UBN1 327 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 CDH22Q9UJ99 828 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 UBQLN1Q9UMX0 589 aaKnown RBP15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 CLUHO75153 1309 aa15.84■□□□□ 0.13
NIF3L1-205ENST00000409588 PPP6R2O75170 966 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 RFPL2O75678 378 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 SP100P23497 879 aaPredicted RBP15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 LRPAP1P30533 357 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 PPP2R3AQ06190 1150 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 SOX4Q06945 474 aaPredicted RBP15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 MRPL58Q14197 206 aaKnown RBP15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 ZBTB6Q15916 424 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 AXDND1Q5T1B0 1012 aaPredicted RBP15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 TPGS2Q68CL5 300 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 MAP4K3Q8IVH8 894 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 SPNS2Q8IVW8 549 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 SUSD3Q96L08 255 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 ZHX3Q9H4I2 956 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 ASB7Q9H672 318 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 KCNK12Q9HB15 430 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 EXOC7Q9UPT5 735 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 DERAQ9Y315 318 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 STYXL1Q9Y6J8 313 aa15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 MTCL1Q9Y4B5 1905 aaKnown RBP15.83■□□□□ 0.12
NIF3L1-205ENST00000409588 MYH11P35749 1972 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 ARHGEF37A1IGU5 675 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 ABLIM3O94929 683 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 C8AP07357 584 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 HSP90AA1P07900 732 aaKnown RBP15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 HARSP12081 509 aaKnown RBP15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 GBP2P32456 591 aaPredicted RBP15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 ELF1P32519 619 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 ALCAMQ13740 583 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 GLYCTKQ8IVS8 523 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 C3orf58Q8NDZ4 430 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 DDX12PQ92771 950 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 USP28Q96RU2 1077 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 FIZ1Q96SL8 496 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 MSTO1Q9BUK6 570 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 CUEDC2Q9H467 287 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 GOLGA2P5Q9HBQ8 144 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 RAPGEFL1Q9UHV5 662 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 KCNH3Q9ULD8 1083 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 CDY1Q9Y6F8 540 aa15.82■□□□□ 0.12
NIF3L1-205ENST00000409588 TBC1D4O60343 1298 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 TECTAO75443 2155 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 YEATS4O95619 227 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms