RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RFC5P40937 340 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 CFAP58Q5T655 872 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 ANKRD13AQ8IZ07 590 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 MROH7Q68CQ1 1323 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 O00370 1275 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 SPOPO43791 374 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 CYP2C8P10632 490 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 CUL2Q13617 745 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 ALS2CLQ60I27 953 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 TMEM270Q6UE05 265 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 CYFIP2Q96F07 1278 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 CGRRF1Q99675 332 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 MAF1Q9H063 256 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 CCDC113Q9H0I3 377 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 PLAAQ9Y263 795 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 ZC3H11AO75152 810 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 GJB6O95452 261 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 NF2P35240 595 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 NOP14P78316 857 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 DR1Q01658 176 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 PPARDQ03181 441 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 LAMTOR4Q0VGL1 99 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 CUL1Q13616 776 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 FAM160B1Q5W0V3 765 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 GPAT2Q6NUI2 795 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 RNF149Q8NC42 400 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 FAM76AQ8TAV0 307 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 RUFY1Q96T51 708 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 HERPUD2Q9BSE4 406 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 KIAA1586Q9HCI6 787 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 NRBP2Q9NSY0 501 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 ANAPC7Q9UJX3 599 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 KCNH4Q9UQ05 1017 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 EVPLQ92817 2033 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 DNAJC25-GNG10A0A024R161 153 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 MIF4GDA9UHW6 222 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 B4GALT5O43286 388 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 CST3P01034 146 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 CTNNA1P35221 906 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 WDR44Q5JSH3 913 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 CELF3Q5SZQ8 465 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 MCOLN2Q8IZK6 566 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 SEC14L1Q92503 715 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 RPS6KC1Q96S38 1066 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 MTMR12Q9C0I1 747 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 AZI2Q9H6S1 392 aa16.23■□□□□ 0.19
SCAMP4-202ENST00000409472 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 ABLIM1O14639 778 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 CLTAP09496 248 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 CALRP27797 417 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 MNAT1P51948 309 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 PLCB4Q15147 1175 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 UBAP2Q5T6F2 1119 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 LRRC31Q6UY01 552 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 JAMLQ86YT9 394 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 UBL4BQ8N7F7 174 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 KCNN1Q92952 543 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 FAM212AQ96EL1 285 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 SPATA33Q96N06 139 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 MMP19Q99542 508 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 RABEP2Q9H5N1 569 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 CLDN3O15551 220 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 ERLIN2O94905 339 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 CLCN3P51790 818 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 ENPEPQ07075 957 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 NCOA4Q13772 614 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 SIX1Q15475 284 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 SLFN12LQ6IEE8 588 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 ENOSF1Q7L5Y1 443 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 CCDC26Q8TAB7 109 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 PPP1R16BQ96T49 567 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 C11orf70Q9BRQ4 267 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 TMEM134Q9H6X4 195 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 DIS3Q9Y2L1 958 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 PCDHB4Q9Y5E5 795 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 ANK1P16157 1881 aa16.22■□□□□ 0.19
SCAMP4-202ENST00000409472 GOLGA8KD6RF30 607 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 CXCL11O14625 94 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 CSDE1O75534 798 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 TGFB3P10600 412 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 PTGIRP43119 386 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 OSTNP61366 133 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 PPIL2Q13356 520 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 KCTD2Q14681 263 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 CCDC62Q6P9F0 684 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 MAATS1Q7Z4T9 603 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 TMC3Q7Z5M5 1100 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 RHPN2Q8IUC4 686 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 BRSK2Q8IWQ3 736 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 RBBP8NLQ8NC74 664 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 NLRP4Q96MN2 994 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 TCHPQ9BT92 498 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 MINDY3Q9H8M7 445 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 UVRAGQ9P2Y5 699 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 PCDHB2Q9Y5E7 798 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 H0YGN5 161 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 OPA1O60313 960 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 PHF2O75151 1096 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 CYP1A1P04798 512 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms