RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 HSD17B14Q9BPX1 270 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 ADPGKQ9BRR6 497 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 FZD8Q9H461 694 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 TICRRQ7Z2Z1 1910 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 RALGAPA1Q6GYQ0 2036 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 ZNF197O14709 1029 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 CHRNB1P11230 501 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 CCNE1P24864 410 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 VIPR2P41587 438 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 FAM187BQ17R55 369 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 EARS2Q5JPH6 523 aaKnown RBP18.39■□□□□ 0.53
CHMP3-203ENST00000409225 N4BP2L1Q5TBK1 243 aaPredicted RBP18.39■□□□□ 0.53
CHMP3-203ENST00000409225 EEF1DP3Q658K8 133 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 CPLX2Q6PUV4 134 aaKnown RBP18.39■□□□□ 0.53
CHMP3-203ENST00000409225 CD300LGQ6UXG3 332 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 ZNF461Q8TAF7 563 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 DDX1Q92499 740 aaKnown RBP18.39■□□□□ 0.53
CHMP3-203ENST00000409225 ZSWIM3Q96MP5 696 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 CYP4F11Q9HBI6 524 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 GOLGA2P5Q9HBQ8 144 aa18.39■□□□□ 0.53
CHMP3-203ENST00000409225 RBM12Q9NTZ6 932 aaKnown RBP18.39■□□□□ 0.53
CHMP3-203ENST00000409225 FAM205CA6NFA0 338 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 ZNF263O14978 683 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 TRAPPC3O43617 180 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 PRKCBP05771 671 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 PMLP29590 882 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 RBM25P49756 843 aaKnown RBP18.38■□□□□ 0.53
CHMP3-203ENST00000409225 AASDHQ4L235 1098 aaPredicted RBP18.38■□□□□ 0.53
CHMP3-203ENST00000409225 CYP4A22Q5TCH4 519 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 CEP68Q76N32 757 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 LONP2Q86WA8 852 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 SPEM1Q8N4L4 309 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 C3orf58Q8NDZ4 430 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 SMARCD2Q92925 531 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 PPP1R10Q96QC0 940 aaKnown RBP18.38■□□□□ 0.53
CHMP3-203ENST00000409225 TRPV5Q9NQA5 729 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 GJB4Q9NTQ9 266 aa18.38■□□□□ 0.53
CHMP3-203ENST00000409225 ABLIM3O94929 683 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 SEC24AO95486 1093 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 EDN1P05305 212 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 CNR2P34972 360 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 PTGDRQ13258 359 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 MAPK6Q16659 721 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 UPP1Q16831 310 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 SLC8B1Q6J4K2 584 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 HS6ST3Q8IZP7 471 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 FAM160A2Q8N612 972 aaPredicted RBP18.37■□□□□ 0.53
CHMP3-203ENST00000409225 DEPDC1BQ8WUY9 529 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 ZNF274Q96GC6 653 aaPredicted RBP18.37■□□□□ 0.53
CHMP3-203ENST00000409225 UROC1Q96N76 676 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 C2orf40Q9H1Z8 148 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 PCDHA12Q9UN75 941 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 INSL5Q9Y5Q6 135 aa18.37■□□□□ 0.53
CHMP3-203ENST00000409225 CNOT1A5YKK6 2376 aaKnown RBP18.36■□□□□ 0.53
CHMP3-203ENST00000409225 K7ESF4 209 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 NCANO14594 1321 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 FOXD2O60548 495 aaPredicted RBP18.36■□□□□ 0.53
CHMP3-203ENST00000409225 DTNBO60941 627 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 MICAL2O94851 1124 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 GJA1P17302 382 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 ATP2B1P20020 1258 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 LRRC32Q14392 662 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 SF3A2Q15428 464 aaKnown RBP18.36■□□□□ 0.53
CHMP3-203ENST00000409225 Q6ZS52 159 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 TCEAL8Q8IYN2 117 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 ELMOD1Q8N336 334 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 BSNDQ8WZ55 320 aa18.36■□□□□ 0.53
CHMP3-203ENST00000409225 ACKR2O00590 384 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 MOSPD3O75425 235 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 MYL4P12829 197 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 ATF2P15336 505 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 XBP1P17861 261 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 SOX9P48436 509 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 CCDC6Q16204 474 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 CALCRLQ16602 461 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 DCAF4L1Q3SXM0 396 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 IQCEQ6IPM2 695 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 MFSD6LQ8IWD5 586 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 C12orf50Q8NA57 414 aaPredicted RBP18.35■□□□□ 0.53
CHMP3-203ENST00000409225 MCPH1Q8NEM0 835 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 ZSCAN18Q8TBC5 510 aaPredicted RBP18.35■□□□□ 0.53
CHMP3-203ENST00000409225 CSGALNACT1Q8TDX6 532 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 CCDC113Q9H0I3 377 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 TTC12Q9H892 705 aaPredicted RBP18.35■□□□□ 0.53
CHMP3-203ENST00000409225 C2orf42Q9NWW7 574 aa18.35■□□□□ 0.53
CHMP3-203ENST00000409225 SLC38A8A6NNN8 435 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 HEPACAM2A8MVW5 462 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 AXIN1O15169 862 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 PAPSS2O95340 614 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-203ENST00000409225 HOXC13P31276 330 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 TXKP42681 527 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 KPNA1P52294 538 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-203ENST00000409225 SOX4Q06945 474 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-203ENST00000409225 YAF2Q8IY57 180 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 DEPTORQ8TB45 409 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 ZNF512Q96ME7 567 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-203ENST00000409225 ARRDC1-AS1Q9H2J1 176 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
CHMP3-203ENST00000409225 H7C4K7 107 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms