RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 TTC33Q6PID6 262 aaPredicted RBP10.51□□□□□ -0.73
PTPRM-203ENST00000400060 C6orf203Q9P0P8 240 aaPredicted RBP10.51□□□□□ -0.73
PTPRM-203ENST00000400060 RAB26Q9ULW5 256 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 SMCO2A6NFE2 343 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 C2CD2LO14523 706 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 TRMUO75648 421 aaKnown RBP10.51□□□□□ -0.73
PTPRM-203ENST00000400060 CCDC130P13994 396 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 ST13P50502 369 aaKnown RBP10.51□□□□□ -0.73
PTPRM-203ENST00000400060 PLEKHA7Q6IQ23 1121 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 RWDD4Q6NW29 188 aaKnown RBP10.51□□□□□ -0.73
PTPRM-203ENST00000400060 CLEC4GQ6UXB4 293 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 OSBP2Q969R2 916 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 KIAA1683Q9H0B3 1180 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 MCM9Q9NXL9 1143 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 UVRAGQ9P2Y5 699 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 DNAJC12Q9UKB3 198 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 CEMIPQ8WUJ3 1361 aa10.51□□□□□ -0.73
PTPRM-203ENST00000400060 A0A1B0GW55 424 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DDX3XO00571 662 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRM-203ENST00000400060 MAGEC1O60732 1142 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 BCL10O95999 233 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DUX4L2P0CJ85 424 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DUX4L3P0CJ86 424 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DUX4L4P0CJ87 422 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DUX4L5P0CJ88 424 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DUX4L6P0CJ89 424 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DUX4L7P0CJ90 424 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 SOX5P35711 763 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 TUBA3EQ6PEY2 450 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 C4orf50Q6ZRC1 276 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ZNF804AQ7Z570 1209 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 LMCD1Q9NZU5 365 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 DUX4Q9UBX2 424 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 LNPEPQ9UIQ6 1025 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 USP20Q9Y2K6 914 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 BNC1Q01954 994 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 BTKQ06187 659 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 PPP2R5CQ13362 524 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 MYBPC3Q14896 1274 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 NAALADL2Q58DX5 795 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ATAD3BQ5T9A4 648 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 CAPN12Q6ZSI9 719 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 EXOC3L1Q86VI1 746 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 IRGQQ8WZA9 623 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 POLR3CQ9BUI4 534 aaPredicted RBP10.5□□□□□ -0.73
PTPRM-203ENST00000400060 SNX25Q9H3E2 840 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 SOX13Q9UN79 622 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 USTQ9Y2C2 406 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 NDUFB9Q9Y6M9 179 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ARHGEF37A1IGU5 675 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 PFDN6O15212 129 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 GPC4O75487 556 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 PRDM1O75626 825 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 MAGEA4P43358 317 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 INPP1P49441 399 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 RASA2Q15283 850 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 TRIP13Q15645 432 aaPredicted RBP10.5□□□□□ -0.73
PTPRM-203ENST00000400060 TRAF7Q6Q0C0 670 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 TMEM120AQ9BXJ8 343 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 SLC38A10Q9HBR0 1119 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ZSCAN9O15535 394 aaPredicted RBP10.5□□□□□ -0.73
PTPRM-203ENST00000400060 EIF4BP23588 611 aaKnown RBP10.5□□□□□ -0.73
PTPRM-203ENST00000400060 SERPINB9P50453 376 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 GALK1P51570 392 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ALDH18A1P54886 795 aaKnown RBP10.5□□□□□ -0.73
PTPRM-203ENST00000400060 GEMIN4P57678 1058 aaKnown RBP10.5□□□□□ -0.73
PTPRM-203ENST00000400060 SULT2A1Q06520 285 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 KCNH2Q12809 1159 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ATP1A4Q13733 1029 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ALCAMQ13740 583 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 ALDH16A1Q8IZ83 802 aa10.5□□□□□ -0.73
PTPRM-203ENST00000400060 VWA5AO00534 786 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 HSPA4LO95757 839 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 S100A5P33763 92 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 YWHAEP62258 255 aaKnown RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 LRRC36Q1X8D7 754 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 CELF4Q9BZC1 486 aaKnown RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 WDR12Q9GZL7 423 aaKnown RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 SELENONQ9NZV5 590 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 PARNO95453 639 aaKnown RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 ZNF846Q147U1 533 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 RFX8Q6ZV50 586 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 ILDR1Q86SU0 546 aaPredicted RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 ZBED2Q9BTP6 218 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 PHF20Q9BVI0 1012 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 CDC42EP4Q9H3Q1 356 aaKnown RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 EPS8L2Q9H6S3 715 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 CLIC5Q9NZA1 410 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 TBC1D7Q9P0N9 293 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 TTC7AQ9ULT0 858 aaPredicted RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 ATP8B3O60423 1300 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 RNF103-CHMP3A0A140T963 221 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 PORP16435 677 aaPredicted RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 RASA3Q14644 834 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 SLC35G2Q8TBE7 412 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 RAD54LQ92698 747 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 RBM15Q96T37 977 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 GINM1Q9NU53 330 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms