RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 PAAF1Q9BRP4 392 aa9.12□□□□□ -0.95
BRCC3-205ENST00000399026 GOLGA2P5Q9HBQ8 144 aa9.12□□□□□ -0.95
BRCC3-205ENST00000399026 MARCH5Q9NX47 278 aa9.12□□□□□ -0.95
BRCC3-205ENST00000399026 USP25Q9UHP3 1055 aa9.12□□□□□ -0.95
BRCC3-205ENST00000399026 KCNG1Q9UIX4 513 aa9.12□□□□□ -0.95
BRCC3-205ENST00000399026 SPTBN5Q9NRC6 3674 aaKnown RBP9.12□□□□□ -0.95
BRCC3-205ENST00000399026 TSC2P49815 1807 aa9.12□□□□□ -0.95
BRCC3-205ENST00000399026 AVPP01185 164 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 RPN1P04843 607 aaKnown RBP9.11□□□□□ -0.95
BRCC3-205ENST00000399026 RB1P06400 928 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 GALTP07902 379 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SCP2P22307 547 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 ADSSP30520 456 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 CA8P35219 290 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 PPM1AP35813 382 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 OR1G1P47890 313 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SOX4Q06945 474 aaPredicted RBP9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SPAG1Q07617 926 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 DSC1Q08554 894 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 DPYDQ12882 1025 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SNW1Q13573 536 aaKnown RBP9.11□□□□□ -0.95
BRCC3-205ENST00000399026 ALCAMQ13740 583 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 CAMK1Q14012 370 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 POSTNQ15063 836 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SKIV2LQ15477 1246 aaKnown RBP9.11□□□□□ -0.95
BRCC3-205ENST00000399026 PTPROQ16827 1216 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 TIGD5Q53EQ6 642 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 EPM2AIP1Q7L775 607 aaPredicted RBP9.11□□□□□ -0.95
BRCC3-205ENST00000399026 ADGRD2Q7Z7M1 963 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 COLGALT2Q8IYK4 626 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 KIAA0895Q8NCT3 520 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 ENGASEQ8NFI3 743 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SPPL3Q8TCT6 385 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 POF1BQ8WVV4 589 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 POMGNT1Q8WZA1 660 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SAAL1Q96ER3 474 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 IGSF21Q96ID5 467 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 ZMAT2Q96NC0 199 aaKnown RBP9.11□□□□□ -0.95
BRCC3-205ENST00000399026 ACAP3Q96P50 834 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 CBWD1Q9BRT8 395 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 VN1R3Q9BXE9 311 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 PRDM6Q9NQX0 595 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 ENTPD7Q9NQZ7 604 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 TLR9Q9NR96 1032 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 TOPORSQ9NS56 1045 aaPredicted RBP9.11□□□□□ -0.95
BRCC3-205ENST00000399026 SPG21Q9NZD8 308 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 TUBGCP4Q9UGJ1 667 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 EXOC7Q9UPT5 735 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 PRUNE2Q8WUY3 3088 aa9.11□□□□□ -0.95
BRCC3-205ENST00000399026 UBE4BO95155 1302 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 VWA8A3KMH1 1905 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 A0A0B4J269 797 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 PVALEFA0A1B0GWK0 134 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 GOLGA8IPA6NC78 632 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 GOLGA8JA6NMD2 632 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 NRP1O14786 923 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 OGTO15294 1046 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 EIF3DO15371 548 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 KIF4AO95239 1232 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 THP07101 528 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 ABCD1P33897 745 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 GTF2F1P35269 517 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 HOXD13P35453 343 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 ALDH7A1P49419 539 aaKnown RBP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 ACOT2P49753 483 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 GUCY2FP51841 1108 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 PPP2R3AQ06190 1150 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 STK4Q13043 487 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 TUSC3Q13454 348 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 NAB2Q15742 525 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 ENOX2Q16206 610 aaKnown RBP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 TCEAL5Q5H9L2 206 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 ARMCX5Q6P1M9 558 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 STXBP4Q6ZWJ1 553 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 SNIP1Q8TAD8 396 aaKnown RBP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 SCFD1Q8WVM8 642 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 AUTS2Q8WXX7 1259 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 RSPH1Q8WYR4 309 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 C18orf25Q96B23 403 aaPredicted RBP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 TMEM169Q96HH4 297 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 FAM84AQ96KN4 292 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 B3GALT6Q96L58 329 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 PPP1R10Q96QC0 940 aaKnown RBP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 TCF25Q9BQ70 676 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 TMEM175Q9BSA9 504 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 PCIF1Q9H4Z3 704 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 CNTN3Q9P232 1028 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 KANSL3Q9P2N6 904 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 AGO2Q9UKV8 859 aaKnown RBP9.1□□□□□ -0.95
BRCC3-205ENST00000399026 PLXNA3P51805 1871 aa9.1□□□□□ -0.95
BRCC3-205ENST00000399026 SMIM28A0A1B0GU29 152 aa9.09□□□□□ -0.95
BRCC3-205ENST00000399026 LACTBL1A8MY62 500 aa9.09□□□□□ -0.95
BRCC3-205ENST00000399026 FSCN2O14926 492 aa9.09□□□□□ -0.95
BRCC3-205ENST00000399026 KINO60870 393 aaKnown RBP9.09□□□□□ -0.95
BRCC3-205ENST00000399026 PRPF40AO75400 957 aaKnown RBP9.09□□□□□ -0.95
BRCC3-205ENST00000399026 MYL1P05976 194 aa9.09□□□□□ -0.95
BRCC3-205ENST00000399026 NFICP08651 508 aa9.09□□□□□ -0.95
BRCC3-205ENST00000399026 IGFBP6P24592 240 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-205ENST00000399026 CYP2J2P51589 502 aa9.09□□□□□ -0.95
BRCC3-205ENST00000399026 CLCNKBP51801 687 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms