RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-202ENST00000374426 ARHGAP28Q9P2N2 729 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 FBXO4Q9UKT5 387 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 TPRP12270 2363 aaKnown RBP15.13■□□□□ 0.01
CXCL12-202ENST00000374426 PHLPP2Q6ZVD8 1323 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 SHISA7A6NL88 538 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 CCDC169A6NNP5 214 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 ABLIM1O14639 778 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
CXCL12-202ENST00000374426 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
CXCL12-202ENST00000374426 TARSP26639 723 aaKnown RBP15.12■□□□□ 0.01
CXCL12-202ENST00000374426 TRAPPC10P48553 1259 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 PDIA5Q14554 519 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 ZBTB41Q5SVQ8 909 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 TANGO2Q6ICL3 276 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 TPRG1Q6ZUI0 275 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 IGSF22Q8N9C0 903 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 SNX29Q8TEQ0 813 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 CLDN23Q96B33 292 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 LLPHQ9BRT6 129 aaKnown RBP15.12■□□□□ 0.01
CXCL12-202ENST00000374426 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
CXCL12-202ENST00000374426 MRPL4Q9BYD3 311 aaKnown RBP15.12■□□□□ 0.01
CXCL12-202ENST00000374426 SLC38A7Q9NVC3 462 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
CXCL12-202ENST00000374426 PATJQ8NI35 1801 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 E9PMD0 336 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 NRG2O14511 850 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-202ENST00000374426 PRRG1O14668 218 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 SYN3O14994 580 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 HIP1RO75146 1068 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 SEC24AO95486 1093 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 SEC24BO95487 1268 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 LRG1P02750 347 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 ATF2P15336 505 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 KCNE1P15382 129 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 PTPN2P17706 415 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 PROZP22891 400 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 FCARP24071 287 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 ELF1P32519 619 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 MAGEA9P43362 315 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 CSTF1Q05048 431 aaKnown RBP15.11■□□□□ 0.01
CXCL12-202ENST00000374426 MAPK7Q13164 816 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 FZD5Q13467 585 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 MRPL58Q14197 206 aaKnown RBP15.11■□□□□ 0.01
CXCL12-202ENST00000374426 PRSS36Q5K4E3 855 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 TCEAL8Q8IYN2 117 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 C18orf25Q96B23 403 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-202ENST00000374426 TCEAL4Q96EI5 215 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 CORO1BQ9BR76 489 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 RUSC1Q9BVN2 902 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 TMEM134Q9H6X4 195 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 HEBP1Q9NRV9 189 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 CNTN3Q9P232 1028 aa15.11■□□□□ 0.01
CXCL12-202ENST00000374426 MED19A0JLT2 244 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-202ENST00000374426 PP2D1A8MPX8 630 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 SPTLC1O15269 473 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 MCF2P10911 925 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 CCR2P41597 374 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 TOB1P50616 345 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-202ENST00000374426 ARPP19P56211 112 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 PTGDRQ13258 359 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 DMP1Q13316 513 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-202ENST00000374426 GNL2Q13823 731 aaKnown RBP15.1■□□□□ 0.01
CXCL12-202ENST00000374426 ZNF852Q6ZMS4 543 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 DGLUCYQ7Z3D6 616 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 ZBTB44Q8NCP5 570 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 NELL1Q92832 810 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 ELSPBP1Q96BH3 223 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 ACAP3Q96P50 834 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 NELL2Q99435 816 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 CYP4F11Q9HBI6 524 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 KMT5AQ9NQR1 393 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 FBXL5Q9UKA1 691 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
CXCL12-202ENST00000374426 DNM3Q9UQ16 869 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 PCDHB6Q9Y5E3 794 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 PCDHGA2Q9Y5H1 932 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 INSL5Q9Y5Q6 135 aa15.1■□□□□ 0.01
CXCL12-202ENST00000374426 H7C4K7 107 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 U2AF2P26368 475 aaKnown RBP eCLIP15.09■□□□□ 0.01
CXCL12-202ENST00000374426 CDC25AP30304 524 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 RPL9P32969 192 aaKnown RBP15.09■□□□□ 0.01
CXCL12-202ENST00000374426 RPS9P46781 194 aaKnown RBP15.09■□□□□ 0.01
CXCL12-202ENST00000374426 HMGN5P82970 282 aaKnown RBP15.09■□□□□ 0.01
CXCL12-202ENST00000374426 GRM2Q14416 872 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 PUM1Q14671 1186 aaKnown RBP eCLIP15.09■□□□□ 0.01
CXCL12-202ENST00000374426 IL17AQ16552 155 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 FAM78AQ5JUQ0 283 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 RINT1Q6NUQ1 792 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 MPZL3Q6UWV2 235 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 C1orf186Q6ZWK4 172 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 KCNK18Q7Z418 384 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 ZNF687Q8N1G0 1237 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 DNASE1L2Q92874 299 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 BORCS6Q96GS4 357 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 ZBTB45Q96K62 511 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-202ENST00000374426 SUSD3Q96L08 255 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 DRC1Q96MC2 740 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 TCHPQ9BT92 498 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 DLL3Q9NYJ7 618 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms