RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 NCOA4Q13772 614 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 ZBTB6Q15916 424 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 FAM43BQ6ZT52 329 aaPredicted RBP11.81□□□□□ -0.52
BRCC3-204ENST00000369462 PI4K2AQ9BTU6 479 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 UBN1Q9NPG3 1134 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 TMEM161AQ9NX61 479 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 MIOSQ9NXC5 875 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 DERAQ9Y315 318 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 PCDHB7Q9Y5E2 793 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.81□□□□□ -0.52
BRCC3-204ENST00000369462 ANK1P16157 1881 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 CLSTN1O94985 981 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 ITGB3P05106 788 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 FGFR1P11362 822 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 TRPC3Q13507 836 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
BRCC3-204ENST00000369462 PPFIBP1Q86W92 1011 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 DPP3Q9NY33 737 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 ZMYND8Q9ULU4 1186 aaPredicted RBP11.81□□□□□ -0.52
BRCC3-204ENST00000369462 NOL4O94818 638 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 POMCP01189 267 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 GYPCP04921 128 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 THP07101 528 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 KLHDC7AQ5VTJ3 777 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 HELQQ8TDG4 1101 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 IL23AQ9NPF7 189 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 SIX4Q9UIU6 781 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 LRFN2Q9ULH4 789 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 UBQLN1Q9UMX0 589 aaKnown RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 R3HCC1Q9Y3T6 440 aaKnown RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 RNF225M0QZC1 329 aaPredicted RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 OFD1O75665 1012 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 UPP2O95045 317 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 CASP14P31944 242 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 MYL6P60660 151 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 POLR2FP61218 127 aaKnown RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 SOX4Q06945 474 aaPredicted RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 TBX2Q13207 712 aaPredicted RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 PHLDB3Q6NSJ2 640 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 DPY19L2P1Q6NXN4 242 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 GJB7Q6PEY0 223 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 OTOP2Q7RTS6 562 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 PPP1R10Q96QC0 940 aaKnown RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 PPP1R9BQ96SB3 815 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 NUP58Q9BVL2 599 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 ELAC1Q9H777 363 aaKnown RBP11.8□□□□□ -0.52
BRCC3-204ENST00000369462 GOLGA2P5Q9HBQ8 144 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 SIX2Q9NPC8 291 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 IMPACTQ9P2X3 320 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 TTC3P53804 2025 aa11.8□□□□□ -0.52
BRCC3-204ENST00000369462 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 XPOTO43592 962 aaKnown RBP11.79□□□□□ -0.52
BRCC3-204ENST00000369462 PTMAP06454 111 aaKnown RBP11.79□□□□□ -0.52
BRCC3-204ENST00000369462 PFKMP08237 780 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 UCHL3P15374 230 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 POLR2BP30876 1174 aaKnown RBP11.79□□□□□ -0.52
BRCC3-204ENST00000369462 FXR1P51114 621 aaKnown RBP eCLIP11.79□□□□□ -0.52
BRCC3-204ENST00000369462 FPGSQ05932 587 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 GOLGA8FQ08AF8 430 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 GOLGA8DPQ0D2H9 430 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 WDR44Q5JSH3 913 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 CLLU1OSQ5K130 101 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 C16orf59Q7L2K0 433 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 CCDC186Q7Z3E2 898 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 TSPAN18Q96SJ8 248 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 IMPG2Q9BZV3 1241 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 TTYH3Q9C0H2 523 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 APEX2Q9UBZ4 518 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 ITGA11Q9UKX5 1188 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 AGAP1Q9UPQ3 857 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 GOLGA6L6A8MZA4 724 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 TPM1P09493 284 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 ADKP55263 362 aaKnown RBP11.79□□□□□ -0.52
BRCC3-204ENST00000369462 PPIGQ13427 754 aaKnown RBP eCLIP11.79□□□□□ -0.52
BRCC3-204ENST00000369462 SPOPLQ6IQ16 392 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 RRAGAQ7L523 313 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 CACNA2D4Q7Z3S7 1137 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 ABI1Q8IZP0 508 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 CRIPAKQ8N1N5 446 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 PPM1KQ8N3J5 372 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 CXorf38Q8TB03 319 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 TATDN2Q93075 761 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 GANQ9H2C0 597 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 SLC38A7Q9NVC3 462 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 FHOD1Q9Y613 1164 aa11.79□□□□□ -0.52
BRCC3-204ENST00000369462 RANBP2P49792 3224 aaKnown RBP11.79□□□□□ -0.52
BRCC3-204ENST00000369462 DEKP35659 375 aaKnown RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 RBP5P82980 135 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 TRIM14Q14142 442 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 FIGNQ5HY92 759 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 ZNF365Q70YC5 407 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 ARHGEF19Q8IW93 802 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 CCDC150Q8NCX0 1101 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 NT5C1BQ96P26 610 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms