RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SEZ6Q53EL9 994 aa13□□□□□ -0.33
USF1-203ENST00000368021 TDRD10Q5VZ19 366 aaKnown RBP13□□□□□ -0.33
USF1-203ENST00000368021 NOTUMQ6P988 496 aa13□□□□□ -0.33
USF1-203ENST00000368021 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
USF1-203ENST00000368021 IRF2BP2Q7Z5L9 587 aa13□□□□□ -0.33
USF1-203ENST00000368021 THNSL1Q8IYQ7 743 aa13□□□□□ -0.33
USF1-203ENST00000368021 TXLNBQ8N3L3 684 aa13□□□□□ -0.33
USF1-203ENST00000368021 SEMA4DQ92854 862 aa13□□□□□ -0.33
USF1-203ENST00000368021 CPB2Q96IY4 423 aa13□□□□□ -0.33
USF1-203ENST00000368021 NCAPGQ9BPX3 1015 aa13□□□□□ -0.33
USF1-203ENST00000368021 RASSF4Q9H2L5 321 aa13□□□□□ -0.33
USF1-203ENST00000368021 RPF1Q9H9Y2 349 aaKnown RBP13□□□□□ -0.33
USF1-203ENST00000368021 CDHR5Q9HBB8 845 aa13□□□□□ -0.33
USF1-203ENST00000368021 AJAP1Q9UKB5 411 aaPredicted RBP13□□□□□ -0.33
USF1-203ENST00000368021 NOD1Q9Y239 953 aa13□□□□□ -0.33
USF1-203ENST00000368021 GINS2Q9Y248 185 aa13□□□□□ -0.33
USF1-203ENST00000368021 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 TLR3O15455 904 aaKnown RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 CD4P01730 458 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 PLEKP08567 350 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 CCDC172P0C7W6 258 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 STAG3L1P0CL83 205 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 RAG1P15918 1043 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 FERP16591 822 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 SOX5P35711 763 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 KLHL30Q0D2K2 578 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 DRAP1Q14919 205 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 PTGISQ16647 500 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 GJB7Q6PEY0 223 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 CDR2LQ86X02 465 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 NT5C1BQ96P26 610 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 CELF4Q9BZC1 486 aaKnown RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 GPR88Q9GZN0 384 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 ASB7Q9H672 318 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 ANK1P16157 1881 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 CDH23Q9H251 3354 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 M0QZ92 97 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 EIF4A3P38919 411 aaKnown RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 MAGEA10P43363 369 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 KIF11P52732 1056 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 MFAP3P55082 362 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 MRPS6P82932 125 aaKnown RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 GCNT1Q02742 428 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 BIRC3Q13489 604 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 DUOXA2Q1HG44 320 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 PRPF38BQ5VTL8 546 aaKnown RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 LMBRD2Q68DH5 695 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 ZNF662Q6ZS27 426 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 ENOSF1Q7L5Y1 443 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 ACRBPQ8NEB7 543 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 TMEM40Q8WWA1 233 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 BADQ92934 168 aa12.99□□□□□ -0.33
USF1-203ENST00000368021 C16orf45Q96MC5 204 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 UBE2TQ9NPD8 197 aaPredicted RBP12.99□□□□□ -0.33
USF1-203ENST00000368021 UMODL1Q5DID0 1318 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 AKR1B10O60218 316 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 LRRN2O75325 713 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 HLA-DRAP01903 254 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 CYP2C18P33260 490 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 GRM5P41594 1212 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 GPS2Q13227 327 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 SPA17Q15506 151 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 WDR44Q5JSH3 913 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 SMYD5Q6GMV2 418 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 OR5B17Q8NGF7 314 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
USF1-203ENST00000368021 TBX21Q9UL17 535 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 REXO2Q9Y3B8 237 aaKnown RBP12.98□□□□□ -0.33
USF1-203ENST00000368021 TRPV2Q9Y5S1 764 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 V9GYY5 206 aaPredicted RBP12.98□□□□□ -0.33
USF1-203ENST00000368021 CITO14578 2027 aa12.98□□□□□ -0.33
USF1-203ENST00000368021 VNN1O95497 513 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 CXCL8P10145 99 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 FGFR4P22455 802 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 PIK3CAP42336 1068 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 CCL23P55773 120 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 OSTNP61366 133 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 NT5DC4Q86YG4 428 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 CD302Q8IX05 232 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 PPM1KQ8N3J5 372 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 SHC3Q92529 594 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 JAKMIP2Q96AA8 810 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 C1orf112Q9NSG2 853 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
USF1-203ENST00000368021 FOXN3O00409 490 aaPredicted RBP12.97□□□□□ -0.33
USF1-203ENST00000368021 GFPT2O94808 682 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 TNNT1P13805 278 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 GTF2A1P52655 376 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms