RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CRY1Q16526 586 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 TTC39AQ5SRH9 613 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZFYVE27Q5T4F4 411 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 TMC5Q6UXY8 1006 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 ATF7IPQ6VMQ6 1270 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 C16orf59Q7L2K0 433 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 STK32CQ86UX6 486 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 MAPKAPK5Q8IW41 473 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 DTX3Q8N9I9 347 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 PAWRQ96IZ0 340 aaKnown RBP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 SYT3Q9BQG1 590 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 LNPKQ9C0E8 428 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 ADAM7Q9H2U9 754 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 L2HGDHQ9H9P8 463 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 FTSJ1Q9UET6 329 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 SAP30BPQ9UHR5 308 aaKnown RBP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 CROTQ9UKG9 612 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 MYH1P12882 1939 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 SZT2Q5T011 3432 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 DDX60LQ5H9U9 1706 aaKnown RBP6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 BAG3O95817 575 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 MAP4K4O95819 1239 aaPredicted RBP6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 HMGCRP04035 888 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 CHGBP05060 677 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 CYP2B6P20813 491 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 IRX3P78415 501 aaPredicted RBP6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 CD276Q5ZPR3 534 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 NECAB2Q7Z6G3 386 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 ADGRA1Q86SQ6 560 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 TMEM57Q8N5G2 664 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 LCORQ96JN0 433 aaPredicted RBP6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 MAGEB10Q96LZ2 347 aaPredicted RBP6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 CD244Q9BZW8 370 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 PRO3102Q9H379 93 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZSWIM4Q9H7M6 989 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 DNAJC18Q9H819 358 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 AS3MTQ9HBK9 375 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 TMOD4Q9NZQ9 345 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 PI4KBQ9UBF8 816 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 STAP2Q9UGK3 403 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 HERC5Q9UII4 1024 aaKnown RBP6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 GJD2Q9UKL4 321 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 PCDHA9Q9Y5H5 950 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 ATP23Q9Y6H3 246 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 FPGT-TNNI3KV9GXZ4 949 aa6.28□□□□□ -1.4
RNU4-4P-201ENST00000364588 FLT1P17948 1338 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCDC66A2RUB6 948 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 MROH6A6NGR9 719 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 SURF6O75683 361 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 FBXO21O94952 628 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 LTFP02788 710 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 CYP1A1P04798 512 aaPredicted RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 ASNSP08243 561 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 PYGMP11217 842 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 PDE6AP16499 860 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 BACE1P56817 501 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 HERVK_113P62684 666 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 DYNLL1P63167 89 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCDC158Q5M9N0 1113 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 ARHGAP36Q6ZRI8 547 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 PLEKHH3Q7Z736 793 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 LGI4Q8N135 537 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 MIGA1Q8NAN2 632 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 TRIB2Q92519 343 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 P2RX7Q99572 595 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 PAGR1Q9BTK6 254 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 CELF4Q9BZC1 486 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCDC8Q9H0W5 538 aaPredicted RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 DHX36Q9H2U1 1008 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 NCOA5Q9HCD5 579 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 TXNRD2Q9NNW7 524 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 PIH1D3Q9NQM4 214 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 MORF4L1Q9UBU8 362 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZBTB21Q9ULJ3 1066 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZMYND8Q9ULU4 1186 aaPredicted RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 TELO2Q9Y4R8 837 aa6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 RANBP2P49792 3224 aaKnown RBP6.27□□□□□ -1.41
RNU4-4P-201ENST00000364588 NCANO14594 1321 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 RPTORQ8N122 1335 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZNF839A8K0R7 811 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 B8ZZF3 427 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCER2I3L3R5 266 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 FOXD2O60548 495 aaPredicted RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 IDH1O75874 414 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 NPTXRO95502 500 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 HLA-DOAP06340 250 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 ENO2P09104 434 aaPredicted RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 SRGAP2CP0DJJ0 459 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 PTPN1P18031 435 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 HOXA7P31268 230 aaPredicted RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 CNR2P34972 360 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 ATP8B2P98198 1209 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCL14Q16627 93 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms