RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 EIF3CLB5ME19 914 aaKnown RBP18.67■□□□□ 0.58
CLDN4-201ENST00000340958 FOXN3O00409 490 aaPredicted RBP18.67■□□□□ 0.58
CLDN4-201ENST00000340958 VNN1O95497 513 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 TMEM132DQ14C87 1099 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 SLC10A6Q3KNW5 377 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 ARHGAP29Q52LW3 1261 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 JADE1Q6IE81 842 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 CD302Q8IX05 232 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 TATDN2Q93075 761 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 EIF3CQ99613 913 aaKnown RBP18.67■□□□□ 0.58
CLDN4-201ENST00000340958 LZTFL1Q9NQ48 299 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 PARP2Q9UGN5 583 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 EVI5O60447 810 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 NFICP08651 508 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 ZSCAN20P17040 1043 aaPredicted RBP18.66■□□□□ 0.58
CLDN4-201ENST00000340958 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
CLDN4-201ENST00000340958 HGSNATQ68CP4 663 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 ENOSF1Q7L5Y1 443 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 IRF2BP2Q7Z5L9 587 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 EFCAB13Q8IY85 973 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 HELQQ8TDG4 1101 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 DPF3Q92784 378 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 KAT5Q92993 513 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 KIF12Q96FN5 646 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 TRPV6Q9H1D0 765 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 LUC7LQ9NQ29 371 aaKnown RBP18.66■□□□□ 0.58
CLDN4-201ENST00000340958 HES2Q9Y543 173 aa18.66■□□□□ 0.58
CLDN4-201ENST00000340958 ARVCFO00192 962 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 KRT5P13647 590 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 TNNT1P13805 278 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 ATN1P54259 1190 aaPredicted RBP18.65■□□□□ 0.58
CLDN4-201ENST00000340958 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 PTK2Q05397 1052 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 GFPT1Q06210 699 aaPredicted RBP18.65■□□□□ 0.58
CLDN4-201ENST00000340958 PAK2Q13177 524 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 LRRC26Q2I0M4 334 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 SGSM1Q2NKQ1 1148 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 SPOPLQ6IQ16 392 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 REXO1L1PQ8IX06 675 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 NXF3Q9H4D5 531 aaKnown RBP18.65■□□□□ 0.58
CLDN4-201ENST00000340958 GHRP10912 638 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 MYL6P60660 151 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 NOP14P78316 857 aaKnown RBP18.65■□□□□ 0.58
CLDN4-201ENST00000340958 GCNT1Q02742 428 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 MGAT3Q09327 533 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 ZNF592Q92610 1267 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 IFIH1Q9BYX4 1025 aaKnown RBP18.65■□□□□ 0.58
CLDN4-201ENST00000340958 GPR88Q9GZN0 384 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 PLEKHA5Q9HAU0 1116 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 SEPT11Q9NVA2 429 aaKnown RBP18.65■□□□□ 0.58
CLDN4-201ENST00000340958 ADAMTS1Q9UHI8 967 aa18.65■□□□□ 0.58
CLDN4-201ENST00000340958 CST3P01034 146 aaPredicted RBP18.64■□□□□ 0.57
CLDN4-201ENST00000340958 TBXAS1P24557 533 aaPredicted RBP18.64■□□□□ 0.57
CLDN4-201ENST00000340958 AKAP5P24588 427 aa18.64■□□□□ 0.57
CLDN4-201ENST00000340958 ZNF699Q32M78 642 aa18.64■□□□□ 0.57
CLDN4-201ENST00000340958 HACE1Q8IYU2 909 aa18.64■□□□□ 0.57
CLDN4-201ENST00000340958 TXLNBQ8N3L3 684 aa18.64■□□□□ 0.57
CLDN4-201ENST00000340958 KREMEN1Q96MU8 473 aa18.64■□□□□ 0.57
CLDN4-201ENST00000340958 CHST12Q9NRB3 414 aa18.64■□□□□ 0.57
CLDN4-201ENST00000340958 KIF2AO00139 706 aaPredicted RBP18.63■□□□□ 0.57
CLDN4-201ENST00000340958 CAND2O75155 1236 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 PRKCIP41743 596 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 ZNF618Q5T7W0 954 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 ZNF571Q7Z3V5 609 aaPredicted RBP18.63■□□□□ 0.57
CLDN4-201ENST00000340958 NT5DC4Q86YG4 428 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 DHX38Q92620 1227 aaKnown RBP18.63■□□□□ 0.57
CLDN4-201ENST00000340958 SEZ6LQ9BYH1 1024 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 C2CD2Q9Y426 696 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 PCDHA13Q9Y5I0 950 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 RECQL4O94761 1208 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 ITGB3P05106 788 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 IBSPP21815 317 aaPredicted RBP18.63■□□□□ 0.57
CLDN4-201ENST00000340958 CD52P31358 61 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 MAGEA1P43355 309 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 CUL2Q13617 745 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 SLC18A3Q16572 532 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 FBXO47Q5MNV8 452 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 SLC43A3Q8NBI5 491 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 JAKMIP2Q96AA8 810 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 IPPQ9Y573 584 aa18.63■□□□□ 0.57
CLDN4-201ENST00000340958 CKBP12277 381 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 TNFAIP3P21580 790 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 KIF5AQ12840 1032 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 UBXN11Q5T124 520 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 SLC39A5Q6ZMH5 540 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 SHC3Q92529 594 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 SNX27Q96L92 541 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 APOBEC3GQ9HC16 384 aaKnown RBP18.62■□□□□ 0.57
CLDN4-201ENST00000340958 DPP3Q9NY33 737 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 KLK14Q9P0G3 267 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 PADI3Q9ULW8 664 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 REXO2Q9Y3B8 237 aaKnown RBP18.62■□□□□ 0.57
CLDN4-201ENST00000340958 PCDHB2Q9Y5E7 798 aa18.62■□□□□ 0.57
CLDN4-201ENST00000340958 MEFVO15553 781 aaPredicted RBP18.61■□□□□ 0.57
CLDN4-201ENST00000340958 CYP26A1O43174 497 aa18.61■□□□□ 0.57
CLDN4-201ENST00000340958 KRT86O43790 486 aa18.61■□□□□ 0.57
CLDN4-201ENST00000340958 KIF5CO60282 957 aa18.61■□□□□ 0.57
CLDN4-201ENST00000340958 ASS1P00966 412 aaKnown RBP18.61■□□□□ 0.57
CLDN4-201ENST00000340958 ANXA13P27216 316 aa18.61■□□□□ 0.57
CLDN4-201ENST00000340958 ASTE1Q2TB18 679 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms