RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SOBPA7XYQ1 873 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 TACC1O75410 805 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 PDE6CP51160 858 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 COPB1P53618 953 aaKnown RBP5.57□□□□□ -1.52
LRIT3-201ENST00000327908 GSDMDP57764 484 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 TSPY1Q01534 308 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 GCNT1Q02742 428 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 DSC1Q08554 894 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 ENOX2Q16206 610 aaKnown RBP5.57□□□□□ -1.52
LRIT3-201ENST00000327908 DPCR1Q3MIW9 517 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 ZACNQ401N2 412 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 EEF1DP3Q658K8 133 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF280DQ6N043 979 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 DDX53Q86TM3 631 aaKnown RBP5.57□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF677Q86XU0 584 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 KSR1Q8IVT5 923 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 LEMD2Q8NC56 503 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 SMG8Q8ND04 991 aaKnown RBP5.57□□□□□ -1.52
LRIT3-201ENST00000327908 NEK11Q8NG66 645 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 CLP1Q92989 425 aaKnown RBP5.57□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF689Q96CS4 500 aaPredicted RBP5.57□□□□□ -1.52
LRIT3-201ENST00000327908 TUBGCP2Q9BSJ2 902 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 RHOBTB2Q9BYZ6 727 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 NIF3L1Q9GZT8 377 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 DNAJC25Q9H1X3 360 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 MINDY3Q9H8M7 445 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 ZMYND8Q9ULU4 1186 aaPredicted RBP5.57□□□□□ -1.52
LRIT3-201ENST00000327908 CEP83Q9Y592 693 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 BACE2Q9Y5Z0 518 aa5.57□□□□□ -1.52
LRIT3-201ENST00000327908 EVPLQ92817 2033 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 A0A1W2PQJ5 194 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ANKRD63C9JTQ0 380 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CYP11A1P05108 521 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 URODP06132 367 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SETSIPP0DME0 302 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 HARSP12081 509 aaKnown RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 FMO5P49326 533 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ERVK-21P61565 698 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SMC1AQ14683 1233 aaKnown RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 EXOC3L4Q17RC7 722 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 TPGS2Q68CL5 300 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 DRC7Q8IY82 874 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SYN2Q92777 582 aaPredicted RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 MRFAP1L1Q96HT8 127 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CPB2Q96IY4 423 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SUSD3Q96L08 255 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 DUSP9Q99956 384 aaKnown RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 NCAPGQ9BPX3 1015 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CYLDQ9NQC7 956 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SNTG2Q9NY99 539 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 FNIP2Q9P278 1114 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 FAM50BQ9Y247 325 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ANO9A1A5B4 782 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ARL5CA6NH57 179 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 LACTBL1A8MY62 500 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 PODXLO00592 558 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 PAEPP09466 180 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 PFKLP17858 780 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 TFAMQ00059 246 aaKnown RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 MBTPS1Q14703 1052 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SYCP1Q15431 976 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ZBTB6Q15916 424 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF699Q32M78 642 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 USP41Q3LFD5 358 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SLC39A4Q6P5W5 647 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 DSTYKQ6XUX3 929 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 C4orf50Q6ZRC1 276 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 COLGALT1Q8NBJ5 622 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 WNT8BQ93098 351 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SCLYQ96I15 445 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CASD1Q96PB1 797 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 NOX5Q96PH1 765 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CBWD1Q9BRT8 395 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 KIFC3Q9BVG8 833 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SNX25Q9H3E2 840 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 NDST4Q9H3R1 872 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CBX8Q9HC52 389 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ABCB6Q9NP58 842 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SMIM28A0A1B0GU29 152 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SART1O43290 800 aaKnown RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 TADA2AO75478 443 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 FERP16591 822 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF18P17022 549 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 WARSP23381 471 aaKnown RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CASP5P51878 434 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 IRX5P78411 483 aaPredicted RBP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 NCOA4Q13772 614 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 SLC10A6Q3KNW5 377 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 AGMOQ6ZNB7 445 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 CCDC149Q6ZUS6 474 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 EHBP1Q8NDI1 1231 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 TRIM11Q96F44 468 aa5.56□□□□□ -1.52
LRIT3-201ENST00000327908 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.56□□□□□ -1.52
LRIT3-201ENST00000327908 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CLIC2O15247 247 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CXCL8P10145 99 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 BMPR1AP36894 532 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 AARSP49588 968 aaKnown RBP eCLIP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 PUS10Q3MIT2 529 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms