RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TRAPPC3O43617 180 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 P4HBP07237 508 aaKnown RBP17.36■□□□□ 0.37
SFXN1-201ENST00000321442 CAP2P40123 477 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 MAGEA4P43358 317 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 ALCAMQ13740 583 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 HIF1AQ16665 826 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 RABGAP1LQ5R372 815 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 DLK2Q6UY11 383 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 RGS9BPQ6ZS82 235 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 DNAAF3Q8N9W5 541 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 SLC26A7Q8TE54 656 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 ZBTB10Q96DT7 871 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 A6NJR5 290 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 FSBPO95073 299 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 C9orf131Q5VYM1 1079 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 SLC30A9Q6PML9 568 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 SLC20A1Q8WUM9 679 aa17.36■□□□□ 0.37
SFXN1-201ENST00000321442 ESYT2A0FGR8 921 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 GPC4O75487 556 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ATP6V1G2O95670 118 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ENO1P06733 434 aaKnown RBP17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ATG16L1Q676U5 607 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ST13P4Q8IZP2 240 aaPredicted RBP17.35■□□□□ 0.37
SFXN1-201ENST00000321442 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
SFXN1-201ENST00000321442 DNAJC9Q8WXX5 260 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ELMO3Q96BJ8 720 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 FANCGO15287 622 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 RALAP11233 206 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 P4HA1P13674 534 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ANXA13P27216 316 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 COG2Q14746 738 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 RPS6KA2Q15349 733 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 APOBEC3FQ8IUX4 373 aaKnown RBP17.35■□□□□ 0.37
SFXN1-201ENST00000321442 LRRC43Q8N309 656 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 TAAR1Q96RJ0 339 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ZSWIM1Q9BR11 485 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 KIF9Q9HAQ2 790 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 PRPSAP2O60256 369 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 CNPY4Q8N129 248 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 MSL3Q8N5Y2 521 aaKnown RBP17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ATP11CQ8NB49 1132 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 AGR3Q8TD06 166 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 MORC4Q8TE76 937 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 SLC9A2Q9UBY0 812 aa17.35■□□□□ 0.37
SFXN1-201ENST00000321442 ZWINTO95229 277 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 RARGP13631 454 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 MCUQ8NE86 351 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 CEP70Q8NHQ1 597 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 ACSF2Q96CM8 615 aaPredicted RBP17.34■□□□□ 0.37
SFXN1-201ENST00000321442 ROPN1BQ9BZX4 212 aaPredicted RBP17.34■□□□□ 0.37
SFXN1-201ENST00000321442 ROPN1Q9HAT0 212 aaPredicted RBP17.34■□□□□ 0.37
SFXN1-201ENST00000321442 NRBP2Q9NSY0 501 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 AIPL1Q9NZN9 384 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 DDX3XO00571 662 aaKnown RBP eCLIP17.34■□□□□ 0.371e-17■■■□□ 15.1
SFXN1-201ENST00000321442 TMED1Q13445 227 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 CRYMQ14894 314 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 MAP1SQ66K74 1059 aaPredicted RBP17.34■□□□□ 0.37
SFXN1-201ENST00000321442 AADACL2Q6P093 401 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 LVRNQ6Q4G3 990 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 NUDCD3Q8IVD9 361 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 IQCKQ8N0W5 287 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 AGGF1Q8N302 714 aaeCLIP17.34■□□□□ 0.379e-7■■■□□ 14.8
SFXN1-201ENST00000321442 FGD4Q96M96 766 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 AGPAT3Q9NRZ7 376 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 NDE1Q9NXR1 346 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 UVRAGQ9P2Y5 699 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 AGPSO00116 658 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 PJA2O43164 708 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 MX2P20592 715 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 OSBPP22059 807 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 ACOT2P49753 483 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 ITGB3BPQ13352 177 aaPredicted RBP17.34■□□□□ 0.37
SFXN1-201ENST00000321442 GIT2Q14161 759 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 CRY2Q49AN0 593 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 BCL9LQ86UU0 1499 aa17.34■□□□□ 0.37
SFXN1-201ENST00000321442 SGPL1O95470 568 aa17.33■□□□□ 0.37
SFXN1-201ENST00000321442 SNX16P57768 344 aa17.33■□□□□ 0.37
SFXN1-201ENST00000321442 HSP90AA5PQ58FG0 334 aa17.33■□□□□ 0.37
SFXN1-201ENST00000321442 CDR2LQ86X02 465 aaPredicted RBP17.33■□□□□ 0.37
SFXN1-201ENST00000321442 ATP8B4Q8TF62 1192 aa17.33■□□□□ 0.37
SFXN1-201ENST00000321442 PRCCQ92733 491 aaPredicted RBP17.33■□□□□ 0.37
SFXN1-201ENST00000321442 PURBQ96QR8 312 aaKnown RBP17.33■□□□□ 0.37
SFXN1-201ENST00000321442 ANLNQ9NQW6 1124 aa17.33■□□□□ 0.37
SFXN1-201ENST00000321442 CAPN9O14815 690 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 NVLO15381 856 aaKnown RBP17.33■□□□□ 0.36
SFXN1-201ENST00000321442 IFRD2Q12894 506 aaPredicted RBP17.33■□□□□ 0.36
SFXN1-201ENST00000321442 STXBP2Q15833 593 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 MOB2Q70IA6 237 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 DEPDC1BQ8WUY9 529 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 ABCF3Q9NUQ8 709 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 APOBEC2Q9Y235 224 aaKnown RBP17.33■□□□□ 0.36
SFXN1-201ENST00000321442 GMNNO75496 209 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 RFX1P22670 979 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 EPHA7Q15375 998 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 NLRP7Q8WX94 980 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 CCT6BQ92526 530 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 KIFC3Q9BVG8 833 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 KDM4CQ9H3R0 1056 aa17.33■□□□□ 0.36
SFXN1-201ENST00000321442 KCNA1Q09470 495 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms