RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CNTN6Q9UQ52 1028 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 SSC5DA1L4H1 1573 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 TCRBV7S2A1N4TA0A589 114 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 ATG7O95352 703 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 C4BPAP04003 597 aaKnown RBP26.76■■□□□ 1.87
ROM1-201ENST00000278833 PTPRAP18433 802 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 ERMARDQ5T6L9 678 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 PRAMEF18Q5VWM3 479 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 SWSAP1Q6NVH7 229 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 CCDC105Q8IYK2 499 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 ZNF516Q92618 1163 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 VCPIP1Q96JH7 1222 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 BTBD6Q96KE9 485 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 ACAD9Q9H845 621 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 CYP39A1Q9NYL5 469 aa26.76■■□□□ 1.87
ROM1-201ENST00000278833 DCDC2CA8MYV0 355 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 RIPK2O43353 540 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 SHBGP04278 402 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 MAPK4P31152 587 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 RHBDF2Q6PJF5 856 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 OTUD6BQ8N6M0 293 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 FAM213AQ9BRX8 229 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 TEX13BQ9BXU2 312 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 CCDC134Q9H6E4 229 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 EFCC1Q9HA90 598 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 ANAPC7Q9UJX3 599 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 MROH7Q68CQ1 1323 aa26.75■■□□□ 1.87
ROM1-201ENST00000278833 DLATP10515 647 aaKnown RBP26.74■■□□□ 1.87
ROM1-201ENST00000278833 KRT5P13647 590 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 PTK6Q13882 451 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 SKIDA1Q1XH10 827 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 SLFN12LQ6IEE8 588 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 MON1BQ7L1V2 547 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 CPNE8Q86YQ8 564 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 P3H4Q92791 437 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 PPANQ9NQ55 473 aaKnown RBP26.74■■□□□ 1.87
ROM1-201ENST00000278833 CHORDC1Q9UHD1 332 aaPredicted RBP26.74■■□□□ 1.87
ROM1-201ENST00000278833 A0A0G2JMZ2 1700 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 NAMPTP43490 491 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 LIG4P49917 911 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 EMC2Q15006 297 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 WDR44Q5JSH3 913 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 GRK7Q8WTQ7 553 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 BICD1Q96G01 975 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 XPO6Q96QU8 1125 aaKnown RBP26.74■■□□□ 1.87
ROM1-201ENST00000278833 LRRC4CQ9HCJ2 640 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 HOMER3Q9NSC5 361 aa26.74■■□□□ 1.87
ROM1-201ENST00000278833 MAFBQ9Y5Q3 323 aaPredicted RBP26.74■■□□□ 1.87
ROM1-201ENST00000278833 PSTPIP1O43586 416 aa26.73■■□□□ 1.87
ROM1-201ENST00000278833 LDHAP00338 332 aaKnown RBP26.73■■□□□ 1.87
ROM1-201ENST00000278833 HLA-DRAP01903 254 aa26.73■■□□□ 1.87
ROM1-201ENST00000278833 ACO1P21399 889 aaKnown RBP26.73■■□□□ 1.87
ROM1-201ENST00000278833 TMOD1P28289 359 aa26.73■■□□□ 1.87
ROM1-201ENST00000278833 SOX10P56693 466 aa26.73■■□□□ 1.87
ROM1-201ENST00000278833 CAV1Q03135 178 aa26.73■■□□□ 1.87
ROM1-201ENST00000278833 SLC29A2Q14542 456 aa26.73■■□□□ 1.87
ROM1-201ENST00000278833 MICALL1Q8N3F8 863 aa26.73■■□□□ 1.87
ROM1-201ENST00000278833 DHX33Q9H6R0 707 aaKnown RBP26.73■■□□□ 1.87
ROM1-201ENST00000278833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.73■■□□□ 1.87
ROM1-201ENST00000278833 ITIH2P19823 946 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 CALCOCO2Q13137 446 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 TMEM132BQ14DG7 1078 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 SGO2Q562F6 1265 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 NBPF12Q5TAG4 269 aaPredicted RBP26.72■■□□□ 1.87
ROM1-201ENST00000278833 CNPY4Q8N129 248 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 DDX27Q96GQ7 796 aaKnown RBP26.72■■□□□ 1.87
ROM1-201ENST00000278833 PORCNQ9H237 461 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 SEMA4AQ9H3S1 761 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 A1CFQ9NQ94 594 aaKnown RBP26.72■■□□□ 1.87
ROM1-201ENST00000278833 PICK1Q9NRD5 415 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 PROSCO94903 275 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 LIG3P49916 1009 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 STRN3Q13033 797 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 TDRD10Q5VZ19 366 aaKnown RBP26.72■■□□□ 1.87
ROM1-201ENST00000278833 CATSPERGQ6ZRH7 1159 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 PHF13Q86YI8 300 aaPredicted RBP26.72■■□□□ 1.87
ROM1-201ENST00000278833 FNBP1Q96RU3 617 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 ADAM7Q9H2U9 754 aa26.72■■□□□ 1.87
ROM1-201ENST00000278833 RGS16O15492 202 aaPredicted RBP26.71■■□□□ 1.87
ROM1-201ENST00000278833 CLDN3O15551 220 aa26.71■■□□□ 1.87
ROM1-201ENST00000278833 TBXAS1P24557 533 aaPredicted RBP26.71■■□□□ 1.87
ROM1-201ENST00000278833 ARL2P36404 184 aa26.71■■□□□ 1.87
ROM1-201ENST00000278833 DNERQ8NFT8 737 aa26.71■■□□□ 1.87
ROM1-201ENST00000278833 CDCA5Q96FF9 252 aa26.71■■□□□ 1.87
ROM1-201ENST00000278833 CGRRF1Q99675 332 aa26.71■■□□□ 1.87
ROM1-201ENST00000278833 NIFKQ9BYG3 293 aaKnown RBP26.71■■□□□ 1.87
ROM1-201ENST00000278833 DDX20Q9UHI6 824 aaKnown RBP26.71■■□□□ 1.87
ROM1-201ENST00000278833 AGO2Q9UKV8 859 aaKnown RBP26.71■■□□□ 1.87
ROM1-201ENST00000278833 UMODL1Q5DID0 1318 aa26.71■■□□□ 1.87
ROM1-201ENST00000278833 IGKV6D-21A0A0A0MT36 114 aa26.7■■□□□ 1.87
ROM1-201ENST00000278833 TP73O15350 636 aa26.7■■□□□ 1.87
ROM1-201ENST00000278833 DRD4P21917 467 aa26.7■■□□□ 1.87
ROM1-201ENST00000278833 NSFP46459 744 aaKnown RBP26.7■■□□□ 1.87
ROM1-201ENST00000278833 NOL9Q5SY16 702 aaKnown RBP26.7■■□□□ 1.87
ROM1-201ENST00000278833 CRELD2Q6UXH1 353 aaPredicted RBP26.7■■□□□ 1.87
ROM1-201ENST00000278833 CEP89Q96ST8 783 aa26.7■■□□□ 1.87
ROM1-201ENST00000278833 PI4K2AQ9BTU6 479 aa26.7■■□□□ 1.87
ROM1-201ENST00000278833 TMEM134Q9H6X4 195 aa26.7■■□□□ 1.87
ROM1-201ENST00000278833 ACTR5Q9H9F9 607 aaPredicted RBP26.7■■□□□ 1.87
ROM1-201ENST00000278833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms