RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SEPT11Q9NVA2 429 aaKnown RBP19.5■□□□□ 0.71
VIM-201ENST00000224237 MROH7Q68CQ1 1323 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 LACTBL1A8MY62 500 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 MOCS3O95396 460 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 SGPL1O95470 568 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 CST3P01034 146 aaPredicted RBP19.49■□□□□ 0.71
VIM-201ENST00000224237 KRT5P13647 590 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 CYP11B1P15538 503 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 GRM5P41594 1212 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 CRYBB1P53674 252 aaPredicted RBP19.49■□□□□ 0.71
VIM-201ENST00000224237 KCNA10Q16322 511 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 SGSM1Q2NKQ1 1148 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 SLC47A2Q86VL8 602 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 SLC20A1Q8WUM9 679 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 DHX38Q92620 1227 aaKnown RBP19.49■□□□□ 0.71
VIM-201ENST00000224237 ACAP3Q96P50 834 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 ARID3AQ99856 593 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 SALL4Q9UJQ4 1053 aa19.49■□□□□ 0.71
VIM-201ENST00000224237 NOCTQ9UK39 431 aaKnown RBP19.49■□□□□ 0.71
VIM-201ENST00000224237 CTIFO43310 598 aaKnown RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 INHAP05111 366 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 ASGR1P07306 291 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 ARHGEF6Q15052 776 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 NOP9Q86U38 636 aaKnown RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 RPUSD2Q8IZ73 545 aaKnown RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 PCSK9Q8NBP7 692 aaKnown RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 DDX20Q9UHI6 824 aaKnown RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 NUB1Q9Y5A7 615 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 RPLP2P05387 115 aaKnown RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 NFICP08651 508 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 NAP1L1P55209 391 aaKnown RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 SLC10A6Q3KNW5 377 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 JADE1Q6IE81 842 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 CCSAPQ6IQ19 270 aaPredicted RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 RSPH3Q86UC2 560 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 SESTD1Q86VW0 696 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 NT5DC4Q86YG4 428 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 CD302Q8IX05 232 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 TMEM40Q8WWA1 233 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 CCDC94Q9BW85 323 aaPredicted RBP19.48■□□□□ 0.71
VIM-201ENST00000224237 SAGE1Q9NXZ1 904 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 JRKLQ9Y4A0 524 aa19.48■□□□□ 0.71
VIM-201ENST00000224237 A0A0A6YYK5 440 aaPredicted RBP19.47■□□□□ 0.71
VIM-201ENST00000224237 M0QZ92 97 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 MEFVO15553 781 aaPredicted RBP19.47■□□□□ 0.71
VIM-201ENST00000224237 BUB1O43683 1085 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 NPTXRO95502 500 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 BPIFB4P59827 614 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 MYL6P60660 151 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 IFI16Q16666 785 aaKnown RBP19.47■□□□□ 0.71
VIM-201ENST00000224237 FAM47CQ5HY64 1035 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 SCARA3Q6AZY7 606 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 SMYD5Q6GMV2 418 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 GDF6Q6KF10 455 aaPredicted RBP19.47■□□□□ 0.71
VIM-201ENST00000224237 CDC23Q9UJX2 597 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 C2CD2Q9Y426 696 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 CITO14578 2027 aa19.47■□□□□ 0.71
VIM-201ENST00000224237 RALGAPA2Q2PPJ7 1873 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 ACO1P21399 889 aaKnown RBP19.46■□□□□ 0.71
VIM-201ENST00000224237 CDR2Q01850 454 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 ZNF699Q32M78 642 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 PAPD7Q5XG87 772 aaKnown RBP19.46■□□□□ 0.71
VIM-201ENST00000224237 MTERF4Q7Z6M4 381 aaKnown RBP19.46■□□□□ 0.71
VIM-201ENST00000224237 RNF180Q86T96 592 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 ZNF677Q86XU0 584 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 TAF4BQ92750 862 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 CELF4Q9BZC1 486 aaKnown RBP19.46■□□□□ 0.71
VIM-201ENST00000224237 NIF3L1Q9GZT8 377 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 PIN4Q9Y237 131 aaKnown RBP19.46■□□□□ 0.71
VIM-201ENST00000224237 PCDHB2Q9Y5E7 798 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 PTCH2Q9Y6C5 1203 aa19.46■□□□□ 0.71
VIM-201ENST00000224237 TMCO5BA8MYB1 307 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 ENC1O14682 589 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 RRP9O43818 475 aaKnown RBP19.45■□□□□ 0.7
VIM-201ENST00000224237 ATP1A1P05023 1023 aaKnown RBP19.45■□□□□ 0.7
VIM-201ENST00000224237 TMEM253P0C7T8 217 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 GZMAP12544 262 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 GALCP54803 685 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 MRPS6P82932 125 aaKnown RBP19.45■□□□□ 0.7
VIM-201ENST00000224237 AMPD2Q01433 879 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 TMEM132DQ14C87 1099 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 TAF3Q5VWG9 929 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 PALB2Q86YC2 1186 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 CTNNBL1Q8WYA6 563 aaPredicted RBP19.45■□□□□ 0.7
VIM-201ENST00000224237 WNT8BQ93098 351 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 TRIM6Q9C030 488 aaPredicted RBP19.45■□□□□ 0.7
VIM-201ENST00000224237 PLEKHA5Q9HAU0 1116 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 ACP6Q9NPH0 428 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 CNTN6Q9UQ52 1028 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 TRIM17Q9Y577 477 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 PCDHGC5Q9Y5F6 944 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 UMODL1Q5DID0 1318 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 ANKRD62A6NC57 917 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 MMEP08473 750 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 CHRNB2P17787 502 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 PRMT2P55345 433 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 FMO1Q01740 532 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 SERINC5Q86VE9 423 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 C1orf127Q8N9H9 656 aa19.45■□□□□ 0.7
VIM-201ENST00000224237 SLAIN1Q8ND83 568 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms