RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 DYRK4Q9NR20 520 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 PXMP2Q9NR77 195 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 TMEM51Q9NW97 253 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 PCDHGA10Q9Y5H3 936 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 USH1CQ9Y6N9 552 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 CABYRO75952 493 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 ITIH2P19823 946 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SERPINB6P35237 376 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SREBF1P36956 1147 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SULT1E1P49888 294 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 ARL4CP56559 192 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 BASP1P80723 227 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 DPYDQ12882 1025 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 DRAP1Q14919 205 aaPredicted RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 VSIG1Q86XK7 387 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 LRRC8CQ8TDW0 803 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 TMEM143Q96AN5 459 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 AGPAT1Q99943 283 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 TUBB6Q9BUF5 446 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 PPP1R12CQ9BZL4 782 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 VCX3BQ9H321 246 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 RUBCNLQ9H714 662 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 ABHD10Q9NUJ1 306 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 LIMA1Q9UHB6 759 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 UBQLN1Q9UMX0 589 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 PARP4Q9UKK3 1724 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 LRRC53A6NM62 1247 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 NDUFAB1O14561 156 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 VCAM1P19320 739 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SOX11P35716 441 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 ACTR2P61160 394 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 GUCY2DQ02846 1103 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 CCDC15Q0P6D6 951 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 MTA1Q13330 715 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SNX1Q13596 522 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 CDO1Q16878 200 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 NXNQ6DKJ4 435 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SHC4Q6S5L8 630 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SYDE1Q6ZW31 735 aaPredicted RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 ANKRD42Q8N9B4 389 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 RUBCNQ92622 972 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 CFAP36Q96G28 342 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 REEP2Q9BRK0 252 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 FSD1LQ9BXM9 530 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 STK33Q9BYT3 514 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 CNOT10Q9H9A5 744 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 TMEM8AQ9HCN3 771 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 TJP2Q9UDY2 1190 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 ANAPC7Q9UJX3 599 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 AGAP1Q9UPQ3 857 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 MAP2P11137 1827 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 ANO9A1A5B4 782 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 SOWAHDA6NJG2 315 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 APOL1O14791 398 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 TGFB3P10600 412 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 MAPTP10636 758 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 NAMPTP43490 491 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 RPS6P62753 249 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 RHOT1Q8IXI2 618 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 RAB42Q8N4Z0 105 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 GDAP1Q8TB36 358 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 FAM71BQ8TC56 605 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 ATP6V1E2Q96A05 226 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 VPS39Q96JC1 886 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 PLEKHA5Q9HAU0 1116 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 KLHL8Q9P2G9 620 aaPredicted RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 REXO2Q9Y3B8 237 aaKnown RBP4.5□□□□□ -1.69
CFTR-201ENST00000003084 ANKRD26Q9UPS8 1709 aa4.5□□□□□ -1.69
CFTR-201ENST00000003084 CHEK2O96017 543 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ADH1BP00325 375 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 DDX5P17844 614 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 VPS41P49754 854 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ST8SIA6P61647 398 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ROR1Q01973 937 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ANO4Q32M45 955 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 DACT2Q5SW24 774 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 PRAMEF18Q5VWM3 479 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 PHLDB2Q86SQ0 1253 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 PDIK1LQ8N165 341 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CDCA5Q96FF9 252 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 NGRNQ9NPE2 291 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 TRIM49BA6NDI0 452 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 NPTXRO95502 500 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 MT-ND3P03897 115 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 TM4SF1P30408 202 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 AXLP30530 894 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 TAF6P49848 677 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CASP7P55210 303 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 NR1H3Q13133 447 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 KLHL38Q2WGJ6 581 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 TAF1BQ53T94 588 aaPredicted RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 ALS2CLQ60I27 953 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CLEC17AQ6ZS10 378 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 RCOR2Q8IZ40 523 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 SYT2Q8N9I0 419 aaPredicted RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.49□□□□□ -1.69
CFTR-201ENST00000003084 MMTAG2Q9BU76 263 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 TRIM9Q9C026 710 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 AGO4Q9HCK5 861 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 RGL1Q9NZL6 768 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms