RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeast

Gene ATG29, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG29	YPL166W	TY1B-ML1	Q04711	1755 aa	Known RBP	2.63	□□□□□ -1.99
ATG29	YPL166W	TY1B-GR2	Q12269	1755 aa		2.63	□□□□□ -1.99
ATG29	YPL166W	TY1B-OL	Q12273	1755 aa		2.63	□□□□□ -1.99
ATG29	YPL166W	TY1B-PL	Q12414	1755 aa	Known RBP	2.63	□□□□□ -1.99
ATG29	YPL166W	NTE1	Q04958	1679 aa		2.63	□□□□□ -1.99
ATG29	YPL166W	ILV1	P00927	576 aa	Known RBP	2.62	□□□□□ -1.99
ATG29	YPL166W	GAL7	P08431	366 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	ZWF1	P11412	505 aa	Known RBP	2.62	□□□□□ -1.99
ATG29	YPL166W	COT1	P32798	439 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	UTP30	P36144	274 aa	Known RBP	2.62	□□□□□ -1.99
ATG29	YPL166W	PHO89	P38361	574 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	VPS45	P38932	577 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	VMA7	P39111	118 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	YER188W	P40103	239 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	RPE1	P46969	238 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	USE1	P53146	245 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	PNC1	P53184	216 aa	Known RBP	2.62	□□□□□ -1.99
ATG29	YPL166W	SYF2	P53277	215 aa	Predicted RBP	2.62	□□□□□ -1.99
ATG29	YPL166W	BCP1	Q06338	283 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	CDD1	Q06549	142 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	RTR2	Q12378	196 aa		2.62	□□□□□ -1.99
ATG29	YPL166W	RSF2	P46974	1380 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	DAL80	P26343	269 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	VMA6	P32366	345 aa	Known RBP	2.61	□□□□□ -1.99
ATG29	YPL166W	TFC1	P32367	649 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	ASF2	P32448	525 aa	Predicted RBP	2.61	□□□□□ -1.99
ATG29	YPL166W	CAT2	P32796	670 aa	Known RBP	2.61	□□□□□ -1.99
ATG29	YPL166W	CLG1	P35190	452 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	ETR1	P38071	380 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	POP8	P38208	133 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	SPL2	P38839	148 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	FMP32	P43557	207 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	LSM8	P47093	109 aa	Known RBP	2.61	□□□□□ -1.99
ATG29	YPL166W	DIE2	P50076	525 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	DID2	P69771	204 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	PET117	Q02771	107 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	SPC2	Q04969	178 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	FMP16	Q12497	93 aa		2.61	□□□□□ -1.99
ATG29	YPL166W	MLP1	Q02455	1875 aa	Known RBP	2.6	□□□□□ -1.99
ATG29	YPL166W	CHC1	P22137	1653 aa	Known RBP	2.6	□□□□□ -1.99
ATG29	YPL166W	KSS1	P14681	368 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	ATG22	P25568	528 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	ATG15	P25641	520 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	TAF14	P35189	244 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	YPT52	P36018	234 aa	Known RBP	2.6	□□□□□ -1.99
ATG29	YPL166W	TRM5	P38793	499 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	SUR2	P38992	349 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	AIM2	P39721	246 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	HPM1	P40481	377 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	MNT4	P53745	580 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	YNL260C	P53846	198 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	EBS1	Q03466	884 aa	Known RBP	2.6	□□□□□ -1.99
ATG29	YPL166W	BNA7	Q04066	261 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	ECM18	Q04623	453 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	GMC2	Q06201	188 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	YPD1	Q07688	167 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	ATG31	Q12421	196 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	YCL001W-B	Q96VH2	84 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	YBT1	P32386	1661 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	DOP1	Q03921	1698 aa		2.6	□□□□□ -1.99
ATG29	YPL166W	RPO21	P04050	1733 aa	Known RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	DUR1,2	P32528	1835 aa	Known RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	IML1	P47170	1584 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	RPL22A	P05749	121 aa	Known RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	MATALPHA2	P0CY08	210 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	HMLALPHA2	P0CY09	210 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	RRT12	P25381	491 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	ICL1	P28240	557 aa	Predicted RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	ERG2	P32352	222 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	DOA4	P32571	926 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	PDX3	P38075	228 aa	Known RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	YBR032W	P38223	100 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	POP7	P38291	140 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	MED6	P38782	295 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	THO1	P40040	218 aa	Known RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	EMC2	P47133	292 aa	Known RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	YJR141W	P47172	347 aa	Predicted RBP	2.59	□□□□□ -1.99
ATG29	YPL166W	GIM3	P53900	129 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	RGM1	Q00453	211 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
ATG29	YPL166W	YMR279C	Q03263	540 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	NHP10	Q03435	203 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	PEX10	Q05568	337 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	SPO77	Q06134	477 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	GTT2	Q12390	233 aa		2.59	□□□□□ -1.99
ATG29	YPL166W	YMR316C-A	I2HB70	103 aa		2.58	□□□□□ -2
ATG29	YPL166W	NSP1	P14907	823 aa	Known RBP	2.58	□□□□□ -2
ATG29	YPL166W	YCR101C	P25607	182 aa		2.58	□□□□□ -2
ATG29	YPL166W	CAF4	P36130	643 aa		2.58	□□□□□ -2
ATG29	YPL166W	SKG1	P36169	355 aa		2.58	□□□□□ -2
ATG29	YPL166W	PRS2	P38620	318 aa	Known RBP	2.58	□□□□□ -2
ATG29	YPL166W	SOK1	P40317	901 aa		2.58	□□□□□ -2
ATG29	YPL166W	ERG10	P41338	398 aa	Known RBP	2.58	□□□□□ -2
ATG29	YPL166W	GLG2	P47011	380 aa		2.58	□□□□□ -2
ATG29	YPL166W	YJL016W	P47072	561 aa		2.58	□□□□□ -2
ATG29	YPL166W	RPC17	P47076	161 aa		2.58	□□□□□ -2
ATG29	YPL166W	OST3	P48439	350 aa		2.58	□□□□□ -2
ATG29	YPL166W	RRN5	Q02983	363 aa		2.58	□□□□□ -2
ATG29	YPL166W	YDR249C	Q03787	373 aa		2.58	□□□□□ -2
ATG29	YPL166W	KAP95	Q06142	861 aa	Known RBP	2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms