RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	IRC10	Q08118	586 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	YOR059C	Q08448	450 aa	Known RBP	2.4	□□□□□ -2.03
LCL1	YPL056C	ALG6	Q12001	544 aa	Known RBP	2.4	□□□□□ -2.03
LCL1	YPL056C	YTM1	Q12024	460 aa	Predicted RBP	2.4	□□□□□ -2.03
LCL1	YPL056C	FCF2	Q12035	217 aa	Predicted RBP	2.4	□□□□□ -2.03
LCL1	YPL056C	DAP1	Q12091	152 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	NBP2	Q12163	236 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	TY2A-B	Q12260	438 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	PRS5	Q12265	496 aa	Known RBP	2.4	□□□□□ -2.03
LCL1	YPL056C	TY2A-OR2	Q12293	438 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	TY1A-NL1	Q12391	440 aa	Known RBP	2.4	□□□□□ -2.03
LCL1	YPL056C	TY2A-DR1	Q12392	438 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	ISA2	Q12425	185 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	TY2A-OR1	Q12439	438 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	HUT1	Q12520	339 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	FOL3	Q12676	427 aa	Predicted RBP	2.4	□□□□□ -2.03
LCL1	YPL056C	YDR461C-A	Q2V2P7	80 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	COX19	Q3E731	98 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	TY2A-DR3	Q99303	438 aa		2.4	□□□□□ -2.03
LCL1	YPL056C	ILV1	P00927	576 aa	Known RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	TPI1	P00942	248 aa	Known RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	PAI3	P01094	68 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	SRD1	P09007	221 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	CBS1	P14066	229 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	SAG1	P20840	650 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	MSN1	P22148	382 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YCR023C	P25351	611 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YCL068C	P25593	260 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	HOG1	P32485	435 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	SEC17	P32602	292 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	FMT1	P32785	401 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YSC83	P32792	385 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	COX13	P32799	129 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YKL102C	P34249	101 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	UPS2	P35200	230 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	MRPS9	P38120	278 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	REG2	P38232	338 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	TRS20	P38334	175 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	NDT80	P38830	627 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YHR210C	P38893	341 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	PAC2	P39937	518 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YEA6	P39953	335 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	AYR1	P40471	297 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	MOB1	P40484	314 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	CAT5	P41735	233 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	AVT1	P47082	602 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YJR015W	P47090	510 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	MIC26	P50087	233 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	SBH2	P52871	88 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YGR250C	P53316	781 aa	Known RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	MPP6	P53725	186 aa	Predicted RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	YNL260C	P53846	198 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YNL018C	P53976	612 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	TY1A-DR2	Q03964	440 aa	Known RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	HPT1	Q04178	221 aa	Known RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	ECM22	Q05958	814 aa	Predicted RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	KEI1	Q06346	221 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	NOC4	Q06512	552 aa	Predicted RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	BSP1	Q06604	576 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	MCH1	Q07376	486 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	IRC13	Q08630	104 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	BTS1	Q12051	335 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YPR027C	Q12079	277 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	BSC1	Q12140	328 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	TIR4	Q12218	487 aa	Predicted RBP	2.39	□□□□□ -2.03
LCL1	YPL056C	TRM13	Q12383	476 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	YJR112W-A	Q3E743	109 aa		2.39	□□□□□ -2.03
LCL1	YPL056C	QCR7	P00128	127 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	RAS2	P01120	322 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	CDC9	P04819	755 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	NOP1	P15646	327 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	ATP10	P18496	279 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	ANB1	P19211	157 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	OLE1	P21147	510 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	FEN2	P25621	512 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	OCH1	P31755	480 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	UTR2	P32623	467 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	UGX2	P32772	223 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	EMP70	P32802	667 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	MDL1	P33310	695 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	YKL187C	P34231	750 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	MTR2	P34232	184 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	LSM2	P38203	95 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	PTH1	P38876	190 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	AXL2	P38928	823 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	TVP23	P38962	199 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	EAF5	P39995	279 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SPC25	P40014	221 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SHO1	P40073	367 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	NSA2	P40078	261 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	PRM5	P40476	318 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	PHS1	P40857	217 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	CDC40	P40968	455 aa	Predicted RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	PAM16	P42949	149 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SMD3	P43321	101 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	OTU1	P43558	301 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	PAU5	P43575	122 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	IKS1	P47042	667 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SGF73	P53165	657 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	YAP1802	P53309	568 aa		2.38	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms