RNA–Protein interactions for RNA: YOR269W

PAC1, Transcript of Involved in nuclear migration, part of the dynein/dynactin pathway, yeast

Gene PAC1, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAC1	YOR269W	MDM35	O60200	86 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	MRPL3	P36516	390 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	YHR045W	P38775	560 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	ALP1	P38971	573 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	YEL073C	P39974	107 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	AVT6	P40074	448 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	YJR146W	P47174	117 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	CDC14	Q00684	551 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	TAF9	Q05027	157 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	DCR2	Q05924	578 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	YLR446W	Q06204	433 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	FRE6	Q12473	712 aa		0.91	□□□□□ -2.26
PAC1	YOR269W	DCP1	Q12517	231 aa	Predicted RBP	0.91	□□□□□ -2.26
PAC1	YOR269W	HIS1	P00498	297 aa	Known RBP	0.9	□□□□□ -2.27
PAC1	YOR269W	CPA1	P07258	411 aa	Known RBP	0.9	□□□□□ -2.27
PAC1	YOR269W	MET16	P18408	261 aa	Predicted RBP	0.9	□□□□□ -2.27
PAC1	YOR269W	TPO5	P36029	618 aa		0.9	□□□□□ -2.27
PAC1	YOR269W	YBR220C	P38318	560 aa		0.9	□□□□□ -2.27
PAC1	YOR269W	YHR035W	P38769	630 aa		0.9	□□□□□ -2.27
PAC1	YOR269W	EMC2	P47133	292 aa	Known RBP	0.9	□□□□□ -2.27
PAC1	YOR269W	OST3	P48439	350 aa		0.9	□□□□□ -2.27
PAC1	YOR269W	MND1	P53102	219 aa		0.9	□□□□□ -2.27
PAC1	YOR269W	EBS1	Q03466	884 aa	Known RBP	0.9	□□□□□ -2.27
PAC1	YOR269W	SNX41	Q04053	625 aa		0.9	□□□□□ -2.27
PAC1	YOR269W	AGC1	Q12482	902 aa		0.9	□□□□□ -2.27
PAC1	YOR269W	STE3	P06783	470 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	TFS1	P14306	219 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	SWI3	P32591	825 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	MCH2	P36032	473 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	ADH5	P38113	351 aa	Known RBP	0.89	□□□□□ -2.27
PAC1	YOR269W	SUR2	P38992	349 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	EDC3	P39998	551 aa	Known RBP	0.89	□□□□□ -2.27
PAC1	YOR269W	YER121W	P40076	114 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	YFR054C	P43622	192 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	RPE1	P46969	238 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	COS6	P53344	381 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	GRH1	Q04410	372 aa	Known RBP	0.89	□□□□□ -2.27
PAC1	YOR269W	FCF1	Q05498	189 aa	Predicted RBP	0.89	□□□□□ -2.27
PAC1	YOR269W	FUS2	Q05670	677 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	UTP23	Q12339	254 aa	Known RBP	0.89	□□□□□ -2.27
PAC1	YOR269W	EMC6	Q12431	108 aa		0.89	□□□□□ -2.27
PAC1	YOR269W	TDH1	P00360	332 aa	Known RBP	0.88	□□□□□ -2.27
PAC1	YOR269W	YSR3	P23501	404 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	DAL80	P26343	269 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	IMP1	P28627	190 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	BLI1	P35727	113 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	LAS1	P36146	502 aa	Predicted RBP	0.88	□□□□□ -2.27
PAC1	YOR269W	GIM4	P40005	111 aa	Known RBP	0.88	□□□□□ -2.27
PAC1	YOR269W	KRE29	P40026	464 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	FCY21	P40039	528 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	MRPL49	P40858	161 aa	Predicted RBP	0.88	□□□□□ -2.27
PAC1	YOR269W	YGL114W	P53134	725 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	ARO80	Q04052	950 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	DBP9	Q06218	594 aa	Known RBP	0.88	□□□□□ -2.27
PAC1	YOR269W	CTS2	Q06350	511 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	NFI1	Q12216	726 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	YOR114W	Q12219	294 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	YHR086W-A	Q3E746	53 aa		0.88	□□□□□ -2.27
PAC1	YOR269W	JIP3	O13555	125 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	YBR062C	P38239	180 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	COG3	P40094	801 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	HOC1	P47124	396 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	TIM13	P53299	105 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	TRM12	Q04235	462 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	BUR2	Q05949	395 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	RAF1	Q06891	181 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	YLL007C	Q07799	665 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	ATG5	Q12380	294 aa		0.87	□□□□□ -2.27
PAC1	YOR269W	TAL1	P15019	335 aa	Known RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	YCR025C	P25352	136 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	SMI1	P32566	505 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	CLG1	P35190	452 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	YHI9	P38765	294 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	UTP25	P40498	721 aa	Known RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	ICE2	P40499	491 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	INA22	P40576	216 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	YJL027C	P47063	138 aa	Predicted RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	SLM2	P53955	656 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	KAP95	Q06142	861 aa	Known RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	CUR1	Q06469	252 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	YOR268C	Q08734	132 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	YPL150W	Q12152	901 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	RPL5	P26321	297 aa	Known RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	RPL16B	P26785	198 aa	Known RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	ZRT1	P32804	376 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	IMP3	P32899	183 aa	Predicted RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	YJL016W	P47072	561 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	UBC13	P52490	153 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	TPN1	P53099	579 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	YGR168C	P53293	376 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	OKP1	P53298	406 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	SWT21	P53873	357 aa	Predicted RBP	0.86	□□□□□ -2.27
PAC1	YOR269W	SED1	Q01589	338 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	ATO3	Q12359	275 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	EMP46	Q12396	444 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	GIS3	Q12418	502 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	ISD11	Q6Q560	94 aa		0.86	□□□□□ -2.27
PAC1	YOR269W	RAD10	P06838	210 aa		0.85	□□□□□ -2.27
PAC1	YOR269W	RNR2	P09938	399 aa	Known RBP	0.85	□□□□□ -2.27
PAC1	YOR269W	YSF3	P0C074	85 aa	Predicted RBP	0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 219.7 ms