RNA–Protein interactions for RNA: YNL042W

BOP3, Transcript of Protein of unknown function, yeast

Gene BOP3, Length 1,191 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BOP3	YNL042W	RFA1	P22336	621 aa	Known RBP	10.09	□□□□□ -0.79
BOP3	YNL042W	SEN34	P39707	275 aa		10.09	□□□□□ -0.79
BOP3	YNL042W	LSB3	P43603	459 aa	Known RBP	10.09	□□□□□ -0.79
BOP3	YNL042W	DAN1	P47178	298 aa		10.09	□□□□□ -0.79
BOP3	YNL042W	RNH201	P53942	307 aa		10.09	□□□□□ -0.79
BOP3	YNL042W	PAL1	Q05518	499 aa	Known RBP	10.09	□□□□□ -0.79
BOP3	YNL042W	MXR2	P25566	168 aa		10.08	□□□□□ -0.8
BOP3	YNL042W	IMG2	P25642	146 aa	Predicted RBP	10.08	□□□□□ -0.8
BOP3	YNL042W	RPS27A	P35997	82 aa	Known RBP	10.08	□□□□□ -0.8
BOP3	YNL042W	SDH4	P37298	181 aa		10.08	□□□□□ -0.8
BOP3	YNL042W	RPS27B	P38711	82 aa		10.08	□□□□□ -0.8
BOP3	YNL042W	GPP1	P41277	250 aa	Known RBP	10.08	□□□□□ -0.8
BOP3	YNL042W	SHR5	P41912	237 aa		10.08	□□□□□ -0.8
BOP3	YNL042W	PUS4	P48567	403 aa	Known RBP	10.08	□□□□□ -0.8
BOP3	YNL042W	MNN10	P50108	393 aa	Known RBP	10.08	□□□□□ -0.8
BOP3	YNL042W	THI74	Q04083	370 aa		10.08	□□□□□ -0.8
BOP3	YNL042W	TGS1	Q12052	315 aa		10.08	□□□□□ -0.8
BOP3	YNL042W	CCH1	P50077	2039 aa		10.07	□□□□□ -0.8
BOP3	YNL042W	ARF1	P11076	181 aa	Known RBP	10.07	□□□□□ -0.8
BOP3	YNL042W	APD1	P38281	316 aa		10.07	□□□□□ -0.8
BOP3	YNL042W	YEA4	P40004	342 aa		10.07	□□□□□ -0.8
BOP3	YNL042W	SKP1	P52286	194 aa		10.07	□□□□□ -0.8
BOP3	YNL042W	YIF1	P53845	314 aa	Known RBP	10.07	□□□□□ -0.8
BOP3	YNL042W	SWS2	P53937	143 aa		10.07	□□□□□ -0.8
BOP3	YNL042W	ADD37	Q03233	198 aa		10.07	□□□□□ -0.8
BOP3	YNL042W	MED4	Q12343	284 aa		10.07	□□□□□ -0.8
BOP3	YNL042W	SCEI	P03882	235 aa		10.06	□□□□□ -0.8
BOP3	YNL042W	SEC59	P20048	519 aa		10.06	□□□□□ -0.8
BOP3	YNL042W	MIR1	P23641	311 aa	Known RBP	10.06	□□□□□ -0.8
BOP3	YNL042W	CLB6	P32943	380 aa		10.06	□□□□□ -0.8
BOP3	YNL042W	CIS3	P47001	227 aa		10.06	□□□□□ -0.8
BOP3	YNL042W	YJR011C	P47086	261 aa	Predicted RBP	10.06	□□□□□ -0.8
BOP3	YNL042W	OCA1	P50946	238 aa	Predicted RBP	10.06	□□□□□ -0.8
BOP3	YNL042W	SNP1	Q00916	300 aa	Predicted RBP	10.06	□□□□□ -0.8
BOP3	YNL042W	VPS28	Q02767	242 aa		10.06	□□□□□ -0.8
BOP3	YNL042W	SRP1	Q02821	542 aa	Known RBP	10.06	□□□□□ -0.8
BOP3	YNL042W	AGE1	Q04412	482 aa		10.06	□□□□□ -0.8
BOP3	YNL042W	YPR147C	Q06522	304 aa	Known RBP	10.06	□□□□□ -0.8
BOP3	YNL042W	RAD28	Q12021	506 aa		10.06	□□□□□ -0.8
BOP3	YNL042W	OM14	P38325	134 aa		10.05	□□□□□ -0.8
BOP3	YNL042W	IRC24	P40580	263 aa		10.05	□□□□□ -0.8
BOP3	YNL042W	YJL016W	P47072	561 aa		10.05	□□□□□ -0.8
BOP3	YNL042W	HSV2	P50079	448 aa	Predicted RBP	10.05	□□□□□ -0.8
BOP3	YNL042W	CUZ1	P53899	274 aa		10.05	□□□□□ -0.8
BOP3	YNL042W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	10.05	□□□□□ -0.8	not detected
BOP3	YNL042W	ARL3	Q02804	198 aa		10.05	□□□□□ -0.8
BOP3	YNL042W	YMR265C	Q03508	461 aa	Known RBP	10.05	□□□□□ -0.8
BOP3	YNL042W	MCH4	Q08268	501 aa		10.05	□□□□□ -0.8
BOP3	YNL042W	AIM45	Q12480	344 aa	Known RBP	10.05	□□□□□ -0.8
BOP3	YNL042W	POF1	P25576	258 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	AFG1	P32317	509 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	SRX1	P36077	127 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	YBR292C	P38357	123 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	GNA1	P43577	159 aa	Predicted RBP	10.04	□□□□□ -0.8
BOP3	YNL042W	DUG1	P43616	481 aa	Known RBP	10.04	□□□□□ -0.8
BOP3	YNL042W	ASK10	P48361	1146 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	YNR014W	P53719	212 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	GMC1	Q04399	608 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	BNA5	Q05979	453 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	YLR030W	Q07967	263 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	HNT3	Q08702	217 aa		10.04	□□□□□ -0.8
BOP3	YNL042W	GDH1	P07262	454 aa	Known RBP	10.03	□□□□□ -0.8
BOP3	YNL042W	STP22	P25604	385 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	LAC1	P28496	418 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	SSS1	P35179	80 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	YNK1	P36010	153 aa	Known RBP	10.03	□□□□□ -0.8
BOP3	YNL042W	YPT31	P38555	223 aa	Known RBP	10.03	□□□□□ -0.8
BOP3	YNL042W	STS1	P38637	319 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	YIL152W	P40455	235 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	AIR1	P40507	360 aa	Known RBP	10.03	□□□□□ -0.8
BOP3	YNL042W	PAU15	P40585	124 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	IKS1	P47042	667 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	YNR066C	P53752	436 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	HMS1	Q12398	434 aa		10.03	□□□□□ -0.8
BOP3	YNL042W	IMG1	P25626	169 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	HSP150	P32478	413 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	EMP70	P32802	667 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	NTF2	P33331	125 aa	Known RBP	10.02	□□□□□ -0.81
BOP3	YNL042W	YBR197C	P38306	217 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	SPG5	P42933	373 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	SKO1	Q02100	647 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	MEH1	Q02205	184 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	YPL108W	Q02872	168 aa	Predicted RBP	10.02	□□□□□ -0.81
BOP3	YNL042W	RSM10	Q03201	203 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	YDL086W	Q07505	273 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	REX3	Q12090	404 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	TAD3	Q9URQ3	322 aa		10.02	□□□□□ -0.81
BOP3	YNL042W	AGA2	P32781	87 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	FAT1	P38225	669 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	TOK1	P40310	691 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	SLM1	P40485	686 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	XBP1	P40489	647 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	NIT2	P47016	307 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	MGA1	P53050	456 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	YGL262W	P53054	175 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	HOL1	P53389	586 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	YDR415C	Q04033	374 aa	Predicted RBP	10.01	□□□□□ -0.81
BOP3	YNL042W	ASM4	Q05166	528 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	STP3	Q05937	343 aa		10.01	□□□□□ -0.81
BOP3	YNL042W	YLR456W	Q06199	204 aa		10.01	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms