RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W SME1Q12330 94 aaPredicted RBP2.07□□□□□ -2.08
HRD3YLR207W ICT1Q12385 394 aa2.07□□□□□ -2.08
HRD3YLR207W YPL119C-AQ3E751 87 aa2.07□□□□□ -2.08
HRD3YLR207W CPA1P07258 411 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W RFA3P26755 122 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W YBR032WP38223 100 aa2.07□□□□□ -2.08
HRD3YLR207W MDM31P38880 579 aa2.07□□□□□ -2.08
HRD3YLR207W SRP14P38985 146 aa2.07□□□□□ -2.08
HRD3YLR207W PEX22P39718 180 aa2.07□□□□□ -2.08
HRD3YLR207W BUD13P46947 266 aaPredicted RBP2.07□□□□□ -2.08
HRD3YLR207W CIS3P47001 227 aa2.07□□□□□ -2.08
HRD3YLR207W JHD2P47156 728 aaPredicted RBP2.07□□□□□ -2.08
HRD3YLR207W MIC26P50087 233 aa2.07□□□□□ -2.08
HRD3YLR207W YPS5P53057 165 aa2.07□□□□□ -2.08
HRD3YLR207W VHT1P53241 593 aa2.07□□□□□ -2.08
HRD3YLR207W YGR067CP53243 804 aa2.07□□□□□ -2.08
HRD3YLR207W CLD1P53264 445 aa2.07□□□□□ -2.08
HRD3YLR207W CRZ1P53968 678 aa2.07□□□□□ -2.08
HRD3YLR207W GMC1Q04399 608 aa2.07□□□□□ -2.08
HRD3YLR207W ERP1Q05359 219 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W YPR091CQ06833 770 aa2.07□□□□□ -2.08
HRD3YLR207W ESA1Q08649 445 aa2.07□□□□□ -2.08
HRD3YLR207W PST1Q12355 444 aa2.07□□□□□ -2.08
HRD3YLR207W RPL15AP05748 204 aaKnown RBP2.06□□□□□ -2.08
HRD3YLR207W RPS18AP0CX55 146 aaKnown RBP2.06□□□□□ -2.08
HRD3YLR207W RPS18BP0CX56 146 aaPredicted RBP2.06□□□□□ -2.08
HRD3YLR207W CBS2P14905 389 aa2.06□□□□□ -2.08
HRD3YLR207W FPR1P20081 114 aaKnown RBP2.06□□□□□ -2.08
HRD3YLR207W MRPL20P22354 195 aaPredicted RBP2.06□□□□□ -2.08
HRD3YLR207W DPB2P24482 689 aaPredicted RBP2.06□□□□□ -2.08
HRD3YLR207W IFM1P25038 676 aa2.06□□□□□ -2.08
HRD3YLR207W HOM6P31116 359 aaKnown RBP2.06□□□□□ -2.08
HRD3YLR207W SRX1P36077 127 aa2.06□□□□□ -2.08
HRD3YLR207W MIX23P38162 196 aa2.06□□□□□ -2.08
HRD3YLR207W MOB2P43563 287 aa2.06□□□□□ -2.08
HRD3YLR207W CIN2P46670 268 aa2.06□□□□□ -2.08
HRD3YLR207W NIF3P53081 288 aa2.06□□□□□ -2.08
HRD3YLR207W BOL2P53082 120 aa2.06□□□□□ -2.08
HRD3YLR207W FLC3P53121 802 aa2.06□□□□□ -2.08
HRD3YLR207W GTR2P53290 341 aa2.06□□□□□ -2.08
HRD3YLR207W WSC2P53832 503 aa2.06□□□□□ -2.08
HRD3YLR207W MET31Q03081 177 aa2.06□□□□□ -2.08
HRD3YLR207W TDA1Q03533 586 aa2.06□□□□□ -2.08
HRD3YLR207W YPR098CQ06089 161 aa2.06□□□□□ -2.08
HRD3YLR207W PEX30Q06169 523 aa2.06□□□□□ -2.08
HRD3YLR207W THP3Q12049 470 aaKnown RBP2.06□□□□□ -2.08
HRD3YLR207W DCN1Q12395 269 aa2.06□□□□□ -2.08
HRD3YLR207W PRM4Q12498 284 aa2.06□□□□□ -2.08
HRD3YLR207W YCR102CP25608 368 aa2.06□□□□□ -2.08
HRD3YLR207W PDC2P32896 925 aa2.06□□□□□ -2.08
HRD3YLR207W YKL187CP34231 750 aa2.06□□□□□ -2.08
HRD3YLR207W YBR137WP38276 179 aa2.06□□□□□ -2.08
HRD3YLR207W CYC2P38909 366 aa2.06□□□□□ -2.08
HRD3YLR207W YJL213WP40896 331 aa2.06□□□□□ -2.08
HRD3YLR207W YJL016WP47072 561 aa2.06□□□□□ -2.08
HRD3YLR207W ALG13P53178 202 aa2.06□□□□□ -2.08
HRD3YLR207W LSM3P57743 89 aaKnown RBP2.06□□□□□ -2.08
HRD3YLR207W FSH2Q05015 223 aa2.06□□□□□ -2.08
HRD3YLR207W YLR446WQ06204 433 aa2.06□□□□□ -2.08
HRD3YLR207W SEC10Q06245 871 aa2.06□□□□□ -2.08
HRD3YLR207W SRL1Q08673 210 aa2.06□□□□□ -2.08
HRD3YLR207W BRR2P32639 2163 aaKnown RBP2.05□□□□□ -2.08
HRD3YLR207W SAL1D6W196 494 aa2.05□□□□□ -2.08
HRD3YLR207W QCR2P07257 368 aa2.05□□□□□ -2.08
HRD3YLR207W VPH2P32341 215 aa2.05□□□□□ -2.08
HRD3YLR207W RPR2P40571 144 aa2.05□□□□□ -2.08
HRD3YLR207W NUP57P48837 541 aa2.05□□□□□ -2.08
HRD3YLR207W SLX9P53251 210 aaPredicted RBP2.05□□□□□ -2.08
HRD3YLR207W NRM1P53718 249 aa2.05□□□□□ -2.08
HRD3YLR207W YPR011CQ12251 326 aa2.05□□□□□ -2.08
HRD3YLR207W YDL199CQ12407 687 aa2.05□□□□□ -2.08
HRD3YLR207W YCL012CQ8J0M4 134 aa2.05□□□□□ -2.08
HRD3YLR207W TAD3Q9URQ3 322 aa2.05□□□□□ -2.08
HRD3YLR207W UBR1P19812 1950 aa2.05□□□□□ -2.08
HRD3YLR207W MSB2P32334 1306 aa2.05□□□□□ -2.08
HRD3YLR207W YKR104WP0CE69 306 aa2.05□□□□□ -2.08
HRD3YLR207W RPL35AP0CX84 120 aaKnown RBP2.05□□□□□ -2.08
HRD3YLR207W RPL35BP0CX85 120 aaKnown RBP2.05□□□□□ -2.08
HRD3YLR207W PPH21P23594 369 aa2.05□□□□□ -2.08
HRD3YLR207W YCR090CP25654 182 aaKnown RBP2.05□□□□□ -2.08
HRD3YLR207W ALK2P32789 676 aaPredicted RBP2.05□□□□□ -2.08
HRD3YLR207W WSC4P38739 605 aa2.05□□□□□ -2.08
HRD3YLR207W YND1P40009 630 aa2.05□□□□□ -2.08
HRD3YLR207W KRE29P40026 464 aa2.05□□□□□ -2.08
HRD3YLR207W YNL208WP40159 199 aaKnown RBP2.05□□□□□ -2.08
HRD3YLR207W POG1P40473 351 aa2.05□□□□□ -2.08
HRD3YLR207W BMT5P40493 336 aa2.05□□□□□ -2.08
HRD3YLR207W MEP2P41948 499 aa2.05□□□□□ -2.08
HRD3YLR207W FMP32P43557 207 aa2.05□□□□□ -2.08
HRD3YLR207W COQ5P49017 307 aa2.05□□□□□ -2.08
HRD3YLR207W MGA1P53050 456 aa2.05□□□□□ -2.08
HRD3YLR207W NSA1P53136 463 aaPredicted RBP2.05□□□□□ -2.08
HRD3YLR207W FYV6P53913 173 aa2.05□□□□□ -2.08
HRD3YLR207W RPL22BP56628 122 aaKnown RBP2.05□□□□□ -2.08
HRD3YLR207W YDL114WQ07530 308 aa2.05□□□□□ -2.08
HRD3YLR207W YPL245WQ12179 454 aaKnown RBP2.05□□□□□ -2.08
HRD3YLR207W YGK3Q12222 375 aaPredicted RBP2.05□□□□□ -2.08
HRD3YLR207W YLR126CQ12288 251 aa2.05□□□□□ -2.08
HRD3YLR207W MCK1P21965 375 aaKnown RBP2.04□□□□□ -2.08
HRD3YLR207W CAF4P36130 643 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms