RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W OST3P48439 350 aa2.96□□□□□ -1.94
CTK1YKL139W SLD7Q08457 257 aa2.96□□□□□ -1.94
CTK1YKL139W ISD11Q6Q560 94 aa2.96□□□□□ -1.94
CTK1YKL139W COX5AP00424 153 aa2.95□□□□□ -1.94
CTK1YKL139W RPL27AP0C2H6 136 aaKnown RBP2.95□□□□□ -1.94
CTK1YKL139W RPL27BP0C2H7 136 aaKnown RBP2.95□□□□□ -1.94
CTK1YKL139W BMH1P29311 267 aaKnown RBP2.95□□□□□ -1.94
CTK1YKL139W SFC1P33303 322 aa2.95□□□□□ -1.94
CTK1YKL139W TEM1P38987 245 aa2.95□□□□□ -1.94
CTK1YKL139W YFR045WP43617 309 aa2.95□□□□□ -1.94
CTK1YKL139W ALG9P53868 555 aaKnown RBP2.95□□□□□ -1.94
CTK1YKL139W SMT3Q12306 101 aaKnown RBP2.95□□□□□ -1.94
CTK1YKL139W YPL247CQ12523 523 aa2.95□□□□□ -1.94
CTK1YKL139W YCL012CQ8J0M4 134 aa2.95□□□□□ -1.94
CTK1YKL139W SRY1P36007 326 aa2.95□□□□□ -1.94
CTK1YKL139W BRR6P53062 197 aa2.95□□□□□ -1.94
CTK1YKL139W NOP19P53317 196 aaPredicted RBP2.95□□□□□ -1.94
CTK1YKL139W ABP140Q08641 628 aaKnown RBP2.95□□□□□ -1.94
CTK1YKL139W PST1Q12355 444 aa2.95□□□□□ -1.94
CTK1YKL139W TUS1Q06412 1307 aa2.94□□□□□ -1.94
CTK1YKL139W DBF2P22204 572 aa2.94□□□□□ -1.94
CTK1YKL139W YER189WP40104 122 aa2.94□□□□□ -1.94
CTK1YKL139W ECO1P43605 281 aa2.94□□□□□ -1.94
CTK1YKL139W MIG2P53035 382 aa2.94□□□□□ -1.94
CTK1YKL139W MDM34P53083 459 aa2.94□□□□□ -1.94
CTK1YKL139W GET1P53192 235 aa2.94□□□□□ -1.94
CTK1YKL139W MRX4Q12467 430 aa2.94□□□□□ -1.94
CTK1YKL139W CDC28P00546 298 aaKnown RBP2.93□□□□□ -1.94
CTK1YKL139W SEC22P22214 214 aa2.93□□□□□ -1.94
CTK1YKL139W TOM40P23644 387 aaKnown RBP2.93□□□□□ -1.94
CTK1YKL139W SLX1P38324 304 aa2.93□□□□□ -1.94
CTK1YKL139W PEX17P40155 199 aa2.93□□□□□ -1.94
CTK1YKL139W EMP46Q12396 444 aa2.93□□□□□ -1.94
CTK1YKL139W YHR139C-AO13536 103 aa2.92□□□□□ -1.94
CTK1YKL139W QCR7P00128 127 aa2.92□□□□□ -1.94
CTK1YKL139W IPP1P00817 287 aaKnown RBP2.92□□□□□ -1.94
CTK1YKL139W RNP1P32385 249 aa2.92□□□□□ -1.94
CTK1YKL139W BMT5P40493 336 aa2.92□□□□□ -1.94
CTK1YKL139W IRC18P47056 224 aa2.92□□□□□ -1.94
CTK1YKL139W YPR063CQ12160 140 aa2.92□□□□□ -1.94
CTK1YKL139W ZWF1P11412 505 aaKnown RBP2.91□□□□□ -1.94
CTK1YKL139W ADE1P27616 306 aa2.91□□□□□ -1.94
CTK1YKL139W AST1P35183 429 aa2.91□□□□□ -1.94
CTK1YKL139W CAT5P41735 233 aa2.91□□□□□ -1.94
CTK1YKL139W BXI1P48558 297 aa2.91□□□□□ -1.94
CTK1YKL139W SYF2P53277 215 aaPredicted RBP2.91□□□□□ -1.94
CTK1YKL139W FAR8Q05040 523 aa2.91□□□□□ -1.94
CTK1YKL139W OAC1P32332 324 aa2.91□□□□□ -1.94
CTK1YKL139W SPS18P32572 300 aa2.91□□□□□ -1.94
CTK1YKL139W TKL2P33315 681 aa2.91□□□□□ -1.94
CTK1YKL139W MSA2P36157 363 aa2.91□□□□□ -1.94
CTK1YKL139W YER034WP40022 185 aaKnown RBP2.91□□□□□ -1.94
CTK1YKL139W YIL059CP40520 121 aa2.91□□□□□ -1.94
CTK1YKL139W PFS2P42841 465 aaKnown RBP2.91□□□□□ -1.94
CTK1YKL139W YGL159WP53110 370 aa2.91□□□□□ -1.94
CTK1YKL139W ERV29P53337 310 aa2.91□□□□□ -1.94
CTK1YKL139W PDR17P53844 350 aa2.91□□□□□ -1.94
CTK1YKL139W FCF1Q05498 189 aaPredicted RBP2.91□□□□□ -1.94
CTK1YKL139W CDD1Q06549 142 aa2.91□□□□□ -1.94
CTK1YKL139W YLR030WQ07967 263 aa2.91□□□□□ -1.94
CTK1YKL139W GEP5Q12393 293 aa2.91□□□□□ -1.94
CTK1YKL139W NOT5Q12514 560 aaPredicted RBP2.91□□□□□ -1.94
CTK1YKL139W YLR462WO13556 202 aa2.9□□□□□ -1.95
CTK1YKL139W PRY2P36110 329 aa2.9□□□□□ -1.95
CTK1YKL139W YCR087C-AP37263 153 aa2.9□□□□□ -1.95
CTK1YKL139W YEL075CP39972 122 aa2.9□□□□□ -1.95
CTK1YKL139W YIR035CP40579 254 aa2.9□□□□□ -1.95
CTK1YKL139W ILM1P47155 203 aa2.9□□□□□ -1.95
CTK1YKL139W DRS2P39524 1355 aa2.9□□□□□ -1.95
CTK1YKL139W RAD10P06838 210 aa2.89□□□□□ -1.95
CTK1YKL139W MET2P08465 486 aa2.89□□□□□ -1.95
CTK1YKL139W ERG24P32462 438 aaKnown RBP2.89□□□□□ -1.95
CTK1YKL139W YDR248CQ03786 193 aa2.89□□□□□ -1.95
CTK1YKL139W INM2Q05533 292 aa2.89□□□□□ -1.95
CTK1YKL139W CLP1Q08685 445 aaPredicted RBP2.89□□□□□ -1.95
CTK1YKL139W RPS23AP0CX29 145 aaKnown RBP2.88□□□□□ -1.95
CTK1YKL139W RPS23BP0CX30 145 aa2.88□□□□□ -1.95
CTK1YKL139W GRE3P38715 327 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
CTK1YKL139W TRM5P38793 499 aa2.88□□□□□ -1.95
CTK1YKL139W BBP1Q12365 385 aa2.88□□□□□ -1.95
CTK1YKL139W HTL1Q9URQ5 78 aa2.88□□□□□ -1.95
CTK1YKL139W HIS3P06633 220 aa2.87□□□□□ -1.95
CTK1YKL139W GCN3P14741 305 aa2.87□□□□□ -1.95
CTK1YKL139W RCN1P36054 211 aa2.87□□□□□ -1.95
CTK1YKL139W ECM14P38836 430 aa2.87□□□□□ -1.95
CTK1YKL139W HOP2P53187 214 aa2.87□□□□□ -1.95
CTK1YKL139W YML096WQ04489 525 aa2.87□□□□□ -1.95
CTK1YKL139W YPL257WQ08974 193 aa2.87□□□□□ -1.95
CTK1YKL139W GPM2Q12008 311 aa2.87□□□□□ -1.95
CTK1YKL139W SGA1P08019 549 aa2.87□□□□□ -1.95
CTK1YKL139W DSF1P0CX08 502 aa2.87□□□□□ -1.95
CTK1YKL139W YNR073CP0CX09 502 aa2.87□□□□□ -1.95
CTK1YKL139W APS1P35181 156 aa2.87□□□□□ -1.95
CTK1YKL139W AGC1Q12482 902 aa2.87□□□□□ -1.95
CTK1YKL139W RAD51P25454 400 aa2.86□□□□□ -1.95
CTK1YKL139W ATP7P30902 174 aa2.86□□□□□ -1.95
CTK1YKL139W YGP1P38616 354 aaKnown RBP2.86□□□□□ -1.95
CTK1YKL139W YIL001WP40560 513 aa2.86□□□□□ -1.95
CTK1YKL139W FAR7P43592 221 aa2.86□□□□□ -1.95
CTK1YKL139W GON7P46984 123 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms