RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C ATR1P13090 542 aa2.92□□□□□ -1.94
YIR040CYIR040C SPT15P13393 240 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C FUN14P18411 198 aa2.92□□□□□ -1.94
YIR040CYIR040C MAG1P22134 296 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C TAH1P25638 111 aaPredicted RBP2.92□□□□□ -1.94
YIR040CYIR040C PTC6P25646 442 aa2.92□□□□□ -1.94
YIR040CYIR040C IES6P32617 166 aa2.92□□□□□ -1.94
YIR040CYIR040C PDC2P32896 925 aa2.92□□□□□ -1.94
YIR040CYIR040C PMU1P36069 295 aa2.92□□□□□ -1.94
YIR040CYIR040C POP8P38208 133 aa2.92□□□□□ -1.94
YIR040CYIR040C YBR090CP38253 122 aa2.92□□□□□ -1.94
YIR040CYIR040C YHR035WP38769 630 aa2.92□□□□□ -1.94
YIR040CYIR040C YER189WP40104 122 aa2.92□□□□□ -1.94
YIR040CYIR040C RPL13BP40212 199 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C PTR3P43606 678 aa2.92□□□□□ -1.94
YIR040CYIR040C GWT1P47026 490 aa2.92□□□□□ -1.94
YIR040CYIR040C TAD2P47058 250 aa2.92□□□□□ -1.94
YIR040CYIR040C YDL186WP48568 277 aa2.92□□□□□ -1.94
YIR040CYIR040C RPL9BP51401 191 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C MGA1P53050 456 aa2.92□□□□□ -1.94
YIR040CYIR040C FRE4P53746 719 aa2.92□□□□□ -1.94
YIR040CYIR040C HHT1P61830 136 aa2.92□□□□□ -1.94
YIR040CYIR040C YMR099CQ03161 297 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C CCE1Q03702 353 aa2.92□□□□□ -1.94
YIR040CYIR040C HNT1Q04344 158 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C SHH3Q04487 196 aa2.92□□□□□ -1.94
YIR040CYIR040C YMR315WQ04869 349 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C HRD3Q05787 833 aa2.92□□□□□ -1.94
YIR040CYIR040C GRX8Q05926 109 aa2.92□□□□□ -1.94
YIR040CYIR040C YPR114WQ06107 315 aa2.92□□□□□ -1.94
YIR040CYIR040C TAZ1Q06510 381 aa2.92□□□□□ -1.94
YIR040CYIR040C LDS2Q08218 356 aa2.92□□□□□ -1.94
YIR040CYIR040C YOR283WQ12040 230 aaKnown RBP2.92□□□□□ -1.94
YIR040CYIR040C RGT2Q12300 763 aa2.92□□□□□ -1.94
YIR040CYIR040C PRM4Q12498 284 aa2.92□□□□□ -1.94
YIR040CYIR040C YLR462WO13556 202 aa2.91□□□□□ -1.94
YIR040CYIR040C RPL7AP05737 244 aaKnown RBP2.91□□□□□ -1.94
YIR040CYIR040C RHO2P06781 192 aa2.91□□□□□ -1.94
YIR040CYIR040C ANB1P19211 157 aa2.91□□□□□ -1.94
YIR040CYIR040C EXO70P19658 623 aa2.91□□□□□ -1.94
YIR040CYIR040C MBR1P23493 339 aa2.91□□□□□ -1.94
YIR040CYIR040C SSS1P35179 80 aa2.91□□□□□ -1.94
YIR040CYIR040C HES1P35843 434 aa2.91□□□□□ -1.94
YIR040CYIR040C YBR056WP38081 501 aa2.91□□□□□ -1.94
YIR040CYIR040C YPT10P38146 199 aa2.91□□□□□ -1.94
YIR040CYIR040C MBA1P38300 278 aa2.91□□□□□ -1.94
YIR040CYIR040C MDM31P38880 579 aa2.91□□□□□ -1.94
YIR040CYIR040C HAC1P41546 238 aa2.91□□□□□ -1.94
YIR040CYIR040C YFL064CP43540 174 aa2.91□□□□□ -1.94
YIR040CYIR040C YFL040WP43562 540 aa2.91□□□□□ -1.94
YIR040CYIR040C BUD13P46947 266 aaPredicted RBP2.91□□□□□ -1.94
YIR040CYIR040C YJR012CP47087 207 aa2.91□□□□□ -1.94
YIR040CYIR040C YJR015WP47090 510 aa2.91□□□□□ -1.94
YIR040CYIR040C CPR7P47103 393 aa2.91□□□□□ -1.94
YIR040CYIR040C DAN1P47178 298 aa2.91□□□□□ -1.94
YIR040CYIR040C NUP57P48837 541 aa2.91□□□□□ -1.94
YIR040CYIR040C DIE2P50076 525 aa2.91□□□□□ -1.94
YIR040CYIR040C PEX31P53203 462 aa2.91□□□□□ -1.94
YIR040CYIR040C YNL092WP53934 400 aa2.91□□□□□ -1.94
YIR040CYIR040C SED5Q01590 340 aa2.91□□□□□ -1.94
YIR040CYIR040C MRX11Q03079 207 aa2.91□□□□□ -1.94
YIR040CYIR040C FMN1Q03778 218 aa2.91□□□□□ -1.94
YIR040CYIR040C ARC18Q05933 178 aaKnown RBP2.91□□□□□ -1.94
YIR040CYIR040C LIP2Q06005 328 aa2.91□□□□□ -1.94
YIR040CYIR040C YPL264CQ08980 353 aa2.91□□□□□ -1.94
YIR040CYIR040C YPR202WQ08993 238 aa2.91□□□□□ -1.94
YIR040CYIR040C PFA4Q12006 378 aa2.91□□□□□ -1.94
YIR040CYIR040C FCY1Q12178 158 aa2.91□□□□□ -1.94
YIR040CYIR040C RPL7BQ12213 244 aaKnown RBP2.91□□□□□ -1.94
YIR040CYIR040C FRE7Q12333 620 aa2.91□□□□□ -1.94
YIR040CYIR040C AHA1Q12449 350 aaKnown RBP2.91□□□□□ -1.94
YIR040CYIR040C RAX2Q12465 1220 aa2.91□□□□□ -1.94
YIR040CYIR040C YGL194C-AQ2V2P6 80 aa2.91□□□□□ -1.94
YIR040CYIR040C SPO24Q3E752 67 aa2.91□□□□□ -1.94
YIR040CYIR040C AI5_ALPHAQ9ZZX1 630 aa2.91□□□□□ -1.94
YIR040CYIR040C ADE4P04046 510 aaKnown RBP2.9□□□□□ -1.95
YIR040CYIR040C PEX34P25584 144 aa2.9□□□□□ -1.95
YIR040CYIR040C FMT1P32785 401 aa2.9□□□□□ -1.95
YIR040CYIR040C HOT13P36078 116 aa2.9□□□□□ -1.95
YIR040CYIR040C YBR137WP38276 179 aa2.9□□□□□ -1.95
YIR040CYIR040C MTC4P38335 694 aaKnown RBP2.9□□□□□ -1.95
YIR040CYIR040C RPL14BP38754 138 aaKnown RBP2.9□□□□□ -1.95
YIR040CYIR040C IPT1P38954 527 aa2.9□□□□□ -1.95
YIR040CYIR040C PTI1P39927 425 aaPredicted RBP2.9□□□□□ -1.95
YIR040CYIR040C YER076CP40049 302 aa2.9□□□□□ -1.95
YIR040CYIR040C VFA1P40080 203 aa2.9□□□□□ -1.95
YIR040CYIR040C SWM2P40342 146 aa2.9□□□□□ -1.95
YIR040CYIR040C PAN6P40459 309 aa2.9□□□□□ -1.95
YIR040CYIR040C SGN1P40561 250 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
YIR040CYIR040C MNN5P46982 586 aa2.9□□□□□ -1.95
YIR040CYIR040C MCM22P47167 239 aa2.9□□□□□ -1.95
YIR040CYIR040C SNN1P48232 102 aa2.9□□□□□ -1.95
YIR040CYIR040C SBH1P52870 82 aa2.9□□□□□ -1.95
YIR040CYIR040C VEL1P53058 206 aa2.9□□□□□ -1.95
YIR040CYIR040C MDM34P53083 459 aa2.9□□□□□ -1.95
YIR040CYIR040C YGR039WP53225 103 aa2.9□□□□□ -1.95
YIR040CYIR040C YNR071CP53757 342 aa2.9□□□□□ -1.95
YIR040CYIR040C VPS28Q02767 242 aa2.9□□□□□ -1.95
YIR040CYIR040C COF1Q03048 143 aaKnown RBP2.9□□□□□ -1.95
YIR040CYIR040C YML018CQ03730 393 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms