RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W RNA15P25299 296 aaPredicted RBP2.53□□□□□ -2
PRP18YGR006W ERG10P41338 398 aaKnown RBP2.53□□□□□ -2
PRP18YGR006W YJL028WP47062 111 aa2.53□□□□□ -2
PRP18YGR006W NBP1P52919 319 aaPredicted RBP2.53□□□□□ -2
PRP18YGR006W NOP19P53317 196 aaPredicted RBP2.53□□□□□ -2
PRP18YGR006W SSU72P53538 206 aaPredicted RBP2.53□□□□□ -2
PRP18YGR006W CDC123Q05791 360 aa2.53□□□□□ -2
PRP18YGR006W PLB3Q08108 686 aa2.53□□□□□ -2
PRP18YGR006W GPM2Q12008 311 aa2.53□□□□□ -2
PRP18YGR006W PST1Q12355 444 aa2.53□□□□□ -2
PRP18YGR006W AGC1Q12482 902 aa2.53□□□□□ -2
PRP18YGR006W NOT5Q12514 560 aaPredicted RBP2.53□□□□□ -2
PRP18YGR006W YPL247CQ12523 523 aa2.53□□□□□ -2
PRP18YGR006W YKL183C-AQ3E765 70 aa2.53□□□□□ -2
PRP18YGR006W TUS1Q06412 1307 aa2.52□□□□□ -2.01
PRP18YGR006W IDH1P28834 360 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
PRP18YGR006W RNP1P32385 249 aa2.52□□□□□ -2.01
PRP18YGR006W SMB1P40018 196 aaKnown RBP2.52□□□□□ -2.01
PRP18YGR006W GET1P53192 235 aa2.52□□□□□ -2.01
PRP18YGR006W ASI3P53983 676 aa2.52□□□□□ -2.01
PRP18YGR006W NCB2Q92317 146 aa2.52□□□□□ -2.01
PRP18YGR006W PPH21P23594 369 aa2.51□□□□□ -2.01
PRP18YGR006W HOM6P31116 359 aaKnown RBP2.51□□□□□ -2.01
PRP18YGR006W TAF14P35189 244 aa2.51□□□□□ -2.01
PRP18YGR006W JEN1P36035 616 aa2.51□□□□□ -2.01
PRP18YGR006W FZO1P38297 855 aa2.51□□□□□ -2.01
PRP18YGR006W THO1P40040 218 aaKnown RBP2.51□□□□□ -2.01
PRP18YGR006W COX15P40086 486 aa2.51□□□□□ -2.01
PRP18YGR006W PIR5P46999 287 aa2.51□□□□□ -2.01
PRP18YGR006W KRE28Q04431 385 aa2.51□□□□□ -2.01
PRP18YGR006W SLD7Q08457 257 aa2.51□□□□□ -2.01
PRP18YGR006W CSM4Q08955 156 aa2.51□□□□□ -2.01
PRP18YGR006W ECM5Q03214 1411 aa2.51□□□□□ -2.01
PRP18YGR006W FKS1P38631 1876 aaKnown RBP2.5□□□□□ -2.01
PRP18YGR006W YDR157WA0A023PZE8 133 aa2.5□□□□□ -2.01
PRP18YGR006W RAD10P06838 210 aa2.5□□□□□ -2.01
PRP18YGR006W YBR121C-AP0C5L4 52 aa2.5□□□□□ -2.01
PRP18YGR006W YMR31P19955 123 aa2.5□□□□□ -2.01
PRP18YGR006W MEI4P29467 408 aa2.5□□□□□ -2.01
PRP18YGR006W ECM13P38195 257 aa2.5□□□□□ -2.01
PRP18YGR006W POP7P38291 140 aa2.5□□□□□ -2.01
PRP18YGR006W RPC17P47076 161 aa2.5□□□□□ -2.01
PRP18YGR006W TMA22P47089 198 aaPredicted RBP2.5□□□□□ -2.01
PRP18YGR006W USE1P53146 245 aa2.5□□□□□ -2.01
PRP18YGR006W EMI1Q04406 187 aa2.5□□□□□ -2.01
PRP18YGR006W YDR124WQ04608 324 aa2.5□□□□□ -2.01
PRP18YGR006W SPC2Q04969 178 aa2.5□□□□□ -2.01
PRP18YGR006W FAR8Q05040 523 aa2.5□□□□□ -2.01
PRP18YGR006W YPR098CQ06089 161 aa2.5□□□□□ -2.01
PRP18YGR006W YPR147CQ06522 304 aaKnown RBP2.5□□□□□ -2.01
PRP18YGR006W YBL008W-AQ3E821 79 aa2.5□□□□□ -2.01
PRP18YGR006W YCL012CQ8J0M4 134 aa2.5□□□□□ -2.01
PRP18YGR006W QCR7P00128 127 aa2.49□□□□□ -2.01
PRP18YGR006W QCR2P07257 368 aa2.49□□□□□ -2.01
PRP18YGR006W YKR104WP0CE69 306 aa2.49□□□□□ -2.01
PRP18YGR006W RPO26P20435 155 aa2.49□□□□□ -2.01
PRP18YGR006W VPS21P36017 210 aaKnown RBP2.49□□□□□ -2.01
PRP18YGR006W SSH1P38353 490 aaKnown RBP2.49□□□□□ -2.01
PRP18YGR006W URA8P38627 578 aaPredicted RBP2.49□□□□□ -2.01
PRP18YGR006W TRM5P38793 499 aa2.49□□□□□ -2.01
PRP18YGR006W YER121WP40076 114 aa2.49□□□□□ -2.01
PRP18YGR006W YER188WP40103 239 aa2.49□□□□□ -2.01
PRP18YGR006W YKE4P40544 346 aa2.49□□□□□ -2.01
PRP18YGR006W SNZ3P43545 298 aa2.49□□□□□ -2.01
PRP18YGR006W HOC1P47124 396 aa2.49□□□□□ -2.01
PRP18YGR006W YIP3P53633 176 aa2.49□□□□□ -2.01
PRP18YGR006W SNZ2P53824 298 aa2.49□□□□□ -2.01
PRP18YGR006W MIX17Q03667 156 aa2.49□□□□□ -2.01
PRP18YGR006W YMR114CQ04471 368 aaKnown RBP2.49□□□□□ -2.01
PRP18YGR006W COQ10Q08058 207 aa2.49□□□□□ -2.01
PRP18YGR006W YOR268CQ08734 132 aa2.49□□□□□ -2.01
PRP18YGR006W RIO1Q12196 484 aaKnown RBP2.49□□□□□ -2.01
PRP18YGR006W SNU23Q12368 194 aaPredicted RBP2.49□□□□□ -2.01
PRP18YGR006W DPM1P14020 267 aaKnown RBP2.48□□□□□ -2.01
PRP18YGR006W RFA3P26755 122 aaKnown RBP2.48□□□□□ -2.01
PRP18YGR006W FIG1P38224 298 aa2.48□□□□□ -2.01
PRP18YGR006W FES1P38260 290 aa2.48□□□□□ -2.01
PRP18YGR006W AME1P38313 324 aa2.48□□□□□ -2.01
PRP18YGR006W LSM1P47017 172 aaKnown RBP2.48□□□□□ -2.01
PRP18YGR006W ADO1P47143 340 aaKnown RBP2.48□□□□□ -2.01
PRP18YGR006W JHD2P47156 728 aaPredicted RBP2.48□□□□□ -2.01
PRP18YGR006W MDM34P53083 459 aa2.48□□□□□ -2.01
PRP18YGR006W MRH4P53166 561 aa2.48□□□□□ -2.01
PRP18YGR006W GOT1Q03554 138 aa2.48□□□□□ -2.01
PRP18YGR006W PEX12Q04370 399 aa2.48□□□□□ -2.01
PRP18YGR006W GEP5Q12393 293 aa2.48□□□□□ -2.01
PRP18YGR006W RPL26AP05743 127 aaKnown RBP2.47□□□□□ -2.01
PRP18YGR006W SNA3P14359 133 aa2.47□□□□□ -2.01
PRP18YGR006W SSO1P32867 290 aa2.47□□□□□ -2.01
PRP18YGR006W SGE1P33335 543 aa2.47□□□□□ -2.01
PRP18YGR006W MRPL39P36533 70 aa2.47□□□□□ -2.01
PRP18YGR006W SRP14P38985 146 aa2.47□□□□□ -2.01
PRP18YGR006W POG1P40473 351 aa2.47□□□□□ -2.01
PRP18YGR006W AGE2P40529 298 aa2.47□□□□□ -2.01
PRP18YGR006W RPL26BP53221 127 aaKnown RBP2.47□□□□□ -2.01
PRP18YGR006W IGO1P53897 168 aa2.47□□□□□ -2.01
PRP18YGR006W CTF19Q02732 369 aa2.47□□□□□ -2.01
PRP18YGR006W GRH1Q04410 372 aaKnown RBP2.47□□□□□ -2.01
PRP18YGR006W RRP40Q08285 240 aaKnown RBP2.47□□□□□ -2.01
PRP18YGR006W SYC1Q08553 188 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 102.2 ms