RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC1	YFL008W	SMF2	P38778	549 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	CYC2	P38909	366 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	VAB2	P40003	282 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	IRC22	P40006	225 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	COX15	P40086	486 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	POG1	P40473	351 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YIP5	P53108	310 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	SLX9	P53251	210 aa	Predicted RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	COG5	P53951	403 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YCL001W-A	P87012	153 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YMR279C	Q03263	540 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YMD8	Q03697	442 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	ATC1	Q04005	294 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	CNL1	Q06333	122 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	ARV1	Q06541	321 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	BER1	Q06688	274 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	YDL109C	Q12103	647 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	GIS3	Q12418	502 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	PAR32	Q12515	295 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	YLR099W-A	Q3E798	87 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	MEX67	Q99257	599 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	RAD10	P06838	210 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	ARF1	P11076	181 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	ZWF1	P11412	505 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	NSP1	P14907	823 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	HPR1	P17629	752 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	YPK2	P18961	677 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	PRE1	P22141	198 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	HXT2	P23585	541 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	HMX1	P32339	317 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	COX13	P32799	129 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	CLB6	P32943	380 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	COS9	P36034	407 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	CBT1	P36038	271 aa	Predicted RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	MRPL37	P36532	105 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YBR241C	P38142	488 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YBR062C	P38239	180 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	ERV15	P38312	142 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	SWC5	P38326	303 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	MMS21	P38632	267 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	NSG1	P38837	291 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	WSS1	P38838	269 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	PET8	P38921	284 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	FET3	P38993	636 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	MNN9	P39107	395 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	RBG1	P39729	369 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	MEP1	P40260	492 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YGR201C	P42936	225 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	ASG7	P46993	209 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	MCM22	P47167	239 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YGL204C	P53089	101 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	FLC3	P53121	802 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	VOA1	P53262	265 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	HCH1	P53834	153 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YNL095C	P53932	642 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	MTQ1	P53944	314 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	APS2	Q00381	147 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	SMD1	Q02260	146 aa	Predicted RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	RSM10	Q03201	203 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YDR476C	Q03362	224 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	SPH1	Q06160	661 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	REX4	Q08237	289 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YPL264C	Q08980	353 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	SRO7	Q12038	1033 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	YPR1	Q12458	312 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	AGC1	Q12482	902 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	SNF8	Q12483	233 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	DFM1	Q12743	341 aa	Known RBP	0.87	□□□□□ -2.27
SMC1	YFL008W	SUS1	Q6WNK7	96 aa		0.87	□□□□□ -2.27
SMC1	YFL008W	TDH1	P00360	332 aa	Known RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	TPK3	P05986	398 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	QCR2	P07257	368 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	ATP5	P09457	212 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	RPL31A	P0C2H8	113 aa	Known RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	TCP1	P12612	559 aa	Known RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	CCA1	P21269	546 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	STP22	P25604	385 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	YCR099C	P25657	155 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	UBC8	P28263	218 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	ERG9	P29704	444 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	ARO7	P32178	256 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	MRP49	P32388	137 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	GSP1	P32835	219 aa	Known RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	REC114	P32841	428 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	PTC1	P35182	281 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	YET1	P35723	206 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	YBR056W	P38081	501 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	MAL32	P38158	584 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	IKI1	P38874	309 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	POP2	P39008	433 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	PRP39	P39682	629 aa	Known RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	BUD13	P46947	266 aa	Predicted RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	GTR2	P53290	341 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	MAL12	P53341	584 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	NRK1	P53915	240 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	SLM2	P53955	656 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	REX2	P54964	269 aa	Known RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	EBS1	Q03466	884 aa	Known RBP	0.86	□□□□□ -2.27
SMC1	YFL008W	FMN1	Q03778	218 aa		0.86	□□□□□ -2.27
SMC1	YFL008W	YDR249C	Q03787	373 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms