RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W SFK1P35735 353 aa2.16□□□□□ -2.06
SNX41YDR425W MRPL28P36527 147 aa2.16□□□□□ -2.06
SNX41YDR425W SDH4P37298 181 aa2.16□□□□□ -2.06
SNX41YDR425W MIX23P38162 196 aa2.16□□□□□ -2.06
SNX41YDR425W PEX32P38292 413 aa2.16□□□□□ -2.06
SNX41YDR425W YHR054CP38780 354 aa2.16□□□□□ -2.06
SNX41YDR425W LRP1P38801 184 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W ASP1P38986 381 aaPredicted RBP2.16□□□□□ -2.06
SNX41YDR425W YIL067CP40514 678 aa2.16□□□□□ -2.06
SNX41YDR425W LOH1P47055 219 aa2.16□□□□□ -2.06
SNX41YDR425W SWC4P53201 476 aa2.16□□□□□ -2.06
SNX41YDR425W SHY1P53266 389 aa2.16□□□□□ -2.06
SNX41YDR425W ASI3P53983 676 aa2.16□□□□□ -2.06
SNX41YDR425W ADD37Q03233 198 aa2.16□□□□□ -2.06
SNX41YDR425W MRPS17Q03246 237 aaPredicted RBP2.16□□□□□ -2.06
SNX41YDR425W CWC21Q03375 135 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W SPG3Q04398 127 aaPredicted RBP2.16□□□□□ -2.06
SNX41YDR425W PBA1Q05778 276 aa2.16□□□□□ -2.06
SNX41YDR425W AGC1Q12482 902 aa2.16□□□□□ -2.06
SNX41YDR425W MHT1Q12525 324 aa2.16□□□□□ -2.06
SNX41YDR425W HHF1P02309 103 aaKnown RBP2.15□□□□□ -2.07
SNX41YDR425W LEU4P06208 619 aaKnown RBP2.15□□□□□ -2.07
SNX41YDR425W CDC7P06243 507 aa2.15□□□□□ -2.07
SNX41YDR425W PUT1P09368 476 aa2.15□□□□□ -2.07
SNX41YDR425W AHC2P25649 128 aa2.15□□□□□ -2.07
SNX41YDR425W TIP1P27654 210 aaPredicted RBP2.15□□□□□ -2.07
SNX41YDR425W MRP17P28778 131 aa2.15□□□□□ -2.07
SNX41YDR425W DEG1P31115 442 aaKnown RBP2.15□□□□□ -2.07
SNX41YDR425W MSK1P32048 576 aa2.15□□□□□ -2.07
SNX41YDR425W DOA4P32571 926 aa2.15□□□□□ -2.07
SNX41YDR425W SUR1P33300 382 aa2.15□□□□□ -2.07
SNX41YDR425W SKN1P33336 771 aa2.15□□□□□ -2.07
SNX41YDR425W CHK1P38147 527 aa2.15□□□□□ -2.07
SNX41YDR425W PTH1P38876 190 aaKnown RBP2.15□□□□□ -2.07
SNX41YDR425W MEP1P40260 492 aa2.15□□□□□ -2.07
SNX41YDR425W PAC10P48363 199 aa2.15□□□□□ -2.07
SNX41YDR425W YGL185CP53100 379 aa2.15□□□□□ -2.07
SNX41YDR425W YGL114WP53134 725 aa2.15□□□□□ -2.07
SNX41YDR425W FRE4P53746 719 aa2.15□□□□□ -2.07
SNX41YDR425W NRK1P53915 240 aa2.15□□□□□ -2.07
SNX41YDR425W RUB1Q03919 77 aa2.15□□□□□ -2.07
SNX41YDR425W YMR252CQ04814 134 aa2.15□□□□□ -2.07
SNX41YDR425W KEI1Q06346 221 aa2.15□□□□□ -2.07
SNX41YDR425W DDC1Q08949 612 aa2.15□□□□□ -2.07
SNX41YDR425W CDC21P06785 304 aa2.14□□□□□ -2.07
SNX41YDR425W MIR1P23641 311 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W EXG1P23776 448 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W YCR100CP25606 316 aa2.14□□□□□ -2.07
SNX41YDR425W ATG15P25641 520 aa2.14□□□□□ -2.07
SNX41YDR425W NRP1P32770 719 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SNX41YDR425W SNC2P33328 115 aa2.14□□□□□ -2.07
SNX41YDR425W NTF2P33331 125 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W COS9P36034 407 aa2.14□□□□□ -2.07
SNX41YDR425W DRE2P36152 348 aa2.14□□□□□ -2.07
SNX41YDR425W MRPL15P36523 253 aa2.14□□□□□ -2.07
SNX41YDR425W YCR087C-AP37263 153 aa2.14□□□□□ -2.07
SNX41YDR425W APE3P37302 537 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W MAL32P38158 584 aa2.14□□□□□ -2.07
SNX41YDR425W BMT2P38278 337 aa2.14□□□□□ -2.07
SNX41YDR425W EMC5P40540 141 aa2.14□□□□□ -2.07
SNX41YDR425W COX16P47081 118 aa2.14□□□□□ -2.07
SNX41YDR425W SOL1P50278 321 aa2.14□□□□□ -2.07
SNX41YDR425W SYF2P53277 215 aaPredicted RBP2.14□□□□□ -2.07
SNX41YDR425W MAL12P53341 584 aa2.14□□□□□ -2.07
SNX41YDR425W AAH1P53909 347 aa2.14□□□□□ -2.07
SNX41YDR425W GPI15P53961 229 aa2.14□□□□□ -2.07
SNX41YDR425W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SNX41YDR425W OST6Q03723 332 aa2.14□□□□□ -2.07
SNX41YDR425W CUE4Q04201 117 aaPredicted RBP2.14□□□□□ -2.07
SNX41YDR425W ELP6Q04868 273 aa2.14□□□□□ -2.07
SNX41YDR425W RNH202Q05635 350 aa2.14□□□□□ -2.07
SNX41YDR425W IPK1Q06667 281 aa2.14□□□□□ -2.07
SNX41YDR425W SDO1Q07953 250 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W BSC6Q08280 497 aa2.14□□□□□ -2.07
SNX41YDR425W DCI1Q08558 271 aa2.14□□□□□ -2.07
SNX41YDR425W AKR2Q12013 749 aa2.14□□□□□ -2.07
SNX41YDR425W ERP3Q12403 225 aa2.14□□□□□ -2.07
SNX41YDR425W COX3P00420 269 aa2.14□□□□□ -2.07
SNX41YDR425W HAP2P06774 265 aa2.14□□□□□ -2.07
SNX41YDR425W ADH3P07246 375 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W GPI12P23797 304 aa2.14□□□□□ -2.07
SNX41YDR425W KRR1P25586 316 aaPredicted RBP2.14□□□□□ -2.07
SNX41YDR425W CLB6P32943 380 aa2.14□□□□□ -2.07
SNX41YDR425W DOA1P36037 715 aa2.14□□□□□ -2.07
SNX41YDR425W CMC1P36064 111 aa2.14□□□□□ -2.07
SNX41YDR425W THI2P38141 450 aa2.14□□□□□ -2.07
SNX41YDR425W PAU24P38155 120 aa2.14□□□□□ -2.07
SNX41YDR425W YMR262WP38430 313 aa2.14□□□□□ -2.07
SNX41YDR425W URA8P38627 578 aaPredicted RBP2.14□□□□□ -2.07
SNX41YDR425W CHL4P38907 458 aa2.14□□□□□ -2.07
SNX41YDR425W DLD2P46681 530 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W COG7P53195 279 aa2.14□□□□□ -2.07
SNX41YDR425W TIM21P53220 239 aa2.14□□□□□ -2.07
SNX41YDR425W MPA43P53583 542 aaPredicted RBP2.14□□□□□ -2.07
SNX41YDR425W STD1Q02794 444 aa2.14□□□□□ -2.07
SNX41YDR425W MRP51Q02950 344 aa2.14□□□□□ -2.07
SNX41YDR425W UTP15Q04305 513 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W SEC13Q04491 297 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W YMR253CQ04835 414 aa2.14□□□□□ -2.07
SNX41YDR425W GRX8Q05926 109 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms