RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C HEM25Q07534 307 aa0.58□□□□□ -2.32
PCF11YDR228C TPO4Q12256 659 aa0.58□□□□□ -2.32
PCF11YDR228C FLO9P39712 1322 aa0.58□□□□□ -2.32
PCF11YDR228C YER188C-AP0C0V2 99 aa0.58□□□□□ -2.32
PCF11YDR228C GPA2P10823 449 aa0.58□□□□□ -2.32
PCF11YDR228C SNA3P14359 133 aa0.58□□□□□ -2.32
PCF11YDR228C VPS3P23643 1011 aa0.58□□□□□ -2.32
PCF11YDR228C MRPL40P36534 297 aa0.58□□□□□ -2.32
PCF11YDR228C GOT1Q03554 138 aa0.58□□□□□ -2.32
PCF11YDR228C YOR186WQ08560 144 aa0.58□□□□□ -2.32
PCF11YDR228C RRS1Q08746 203 aaKnown RBP0.58□□□□□ -2.32
PCF11YDR228C YKR104WP0CE69 306 aa0.57□□□□□ -2.32
PCF11YDR228C MRX3P38172 270 aa0.57□□□□□ -2.32
PCF11YDR228C SNZ3P43545 298 aa0.57□□□□□ -2.32
PCF11YDR228C RPA43P46669 326 aa0.57□□□□□ -2.32
PCF11YDR228C RMR1P53060 241 aa0.57□□□□□ -2.32
PCF11YDR228C MPA43P53583 542 aaPredicted RBP0.57□□□□□ -2.32
PCF11YDR228C ATG17Q06410 417 aa0.57□□□□□ -2.32
PCF11YDR228C YPR147CQ06522 304 aaKnown RBP0.57□□□□□ -2.32
PCF11YDR228C YPT52P36018 234 aaKnown RBP0.56□□□□□ -2.32
PCF11YDR228C FIS1P40515 155 aa0.56□□□□□ -2.32
PCF11YDR228C KAP114P53067 1004 aa0.56□□□□□ -2.32
PCF11YDR228C HIS1P00498 297 aaKnown RBP0.56□□□□□ -2.32
PCF11YDR228C OPI1P21957 404 aa0.56□□□□□ -2.32
PCF11YDR228C MEI4P29467 408 aa0.56□□□□□ -2.32
PCF11YDR228C SMB1P40018 196 aaKnown RBP0.56□□□□□ -2.32
PCF11YDR228C YJR056CP47115 236 aa0.56□□□□□ -2.32
PCF11YDR228C COX2P00410 251 aa0.55□□□□□ -2.32
PCF11YDR228C RPL37AP49166 88 aaKnown RBP0.55□□□□□ -2.32
PCF11YDR228C OST6Q03723 332 aa0.55□□□□□ -2.32
PCF11YDR228C ATG39Q06159 398 aa0.55□□□□□ -2.32
PCF11YDR228C YPL257WQ08974 193 aa0.55□□□□□ -2.32
PCF11YDR228C STF1P01098 86 aa0.54□□□□□ -2.32
PCF11YDR228C RSR1P13856 272 aa0.54□□□□□ -2.32
PCF11YDR228C HOM6P31116 359 aaKnown RBP0.54□□□□□ -2.32
PCF11YDR228C JEN1P36035 616 aa0.54□□□□□ -2.32
PCF11YDR228C YBR096WP38256 230 aa0.54□□□□□ -2.32
PCF11YDR228C PRS2P38620 318 aaKnown RBP0.54□□□□□ -2.32
PCF11YDR228C GOS1P38736 223 aa0.54□□□□□ -2.32
PCF11YDR228C RPF1P38805 295 aaKnown RBP0.54□□□□□ -2.32
PCF11YDR228C TIR3P40552 269 aa0.54□□□□□ -2.32
PCF11YDR228C JHD2P47156 728 aaPredicted RBP0.54□□□□□ -2.32
PCF11YDR228C ERV29P53337 310 aa0.54□□□□□ -2.32
PCF11YDR228C YNL046WP53956 172 aa0.54□□□□□ -2.32
PCF11YDR228C UBC7Q02159 165 aa0.54□□□□□ -2.32
PCF11YDR228C SPG4Q04438 115 aa0.54□□□□□ -2.32
PCF11YDR228C YLR413WQ06689 675 aa0.54□□□□□ -2.32
PCF11YDR228C YCT1Q12235 531 aa0.54□□□□□ -2.32
PCF11YDR228C MRPL23Q12487 163 aaPredicted RBP0.54□□□□□ -2.32
PCF11YDR228C SSA3P09435 649 aaKnown RBP0.54□□□□□ -2.32
PCF11YDR228C RSM25P40496 264 aa0.54□□□□□ -2.32
PCF11YDR228C ICE2P40499 491 aa0.54□□□□□ -2.32
PCF11YDR228C RPL33BP41056 107 aaKnown RBP0.54□□□□□ -2.32
PCF11YDR228C YAR1P46683 200 aa0.54□□□□□ -2.32
PCF11YDR228C BOL2P53082 120 aa0.54□□□□□ -2.32
PCF11YDR228C RRP40Q08285 240 aaKnown RBP0.54□□□□□ -2.32
PCF11YDR228C TMA19P35691 167 aaKnown RBP0.53□□□□□ -2.32
PCF11YDR228C VPS21P36017 210 aaKnown RBP0.53□□□□□ -2.32
PCF11YDR228C ECM33P38248 429 aaKnown RBP0.53□□□□□ -2.32
PCF11YDR228C YER076CP40049 302 aa0.53□□□□□ -2.32
PCF11YDR228C NIP7Q08962 181 aaKnown RBP0.53□□□□□ -2.32
PCF11YDR228C YIL002W-AQ3E7Z5 69 aa0.53□□□□□ -2.32
PCF11YDR228C QCR8P08525 94 aa0.52□□□□□ -2.33
PCF11YDR228C GLG2P47011 380 aa0.52□□□□□ -2.33
PCF11YDR228C SNZ2P53824 298 aa0.52□□□□□ -2.33
PCF11YDR228C EGD1Q02642 157 aaKnown RBP0.52□□□□□ -2.33
PCF11YDR228C HTL1Q9URQ5 78 aa0.52□□□□□ -2.33
PCF11YDR228C SSK22P25390 1331 aaPredicted RBP0.52□□□□□ -2.33
PCF11YDR228C AQY2P0CD90 149 aa0.52□□□□□ -2.33
PCF11YDR228C ERD2P18414 219 aa0.52□□□□□ -2.33
PCF11YDR228C FZF1P32805 299 aa0.52□□□□□ -2.33
PCF11YDR228C ALG11P53954 548 aaKnown RBP0.52□□□□□ -2.33
PCF11YDR228C YPL229WQ99395 206 aa0.52□□□□□ -2.33
PCF11YDR228C RPL27BP0C2H7 136 aaKnown RBP0.51□□□□□ -2.33
PCF11YDR228C MRPL39P36533 70 aa0.51□□□□□ -2.33
PCF11YDR228C YPR098CQ06089 161 aa0.51□□□□□ -2.33
PCF11YDR228C RPS5P26783 225 aaKnown RBP0.5□□□□□ -2.33
PCF11YDR228C YPL162CQ12042 273 aa0.5□□□□□ -2.33
PCF11YDR228C YOR020W-AQ3E824 90 aa0.5□□□□□ -2.33
PCF11YDR228C PET100P38958 111 aa0.5□□□□□ -2.33
PCF11YDR228C YEL067CP39978 195 aa0.5□□□□□ -2.33
PCF11YDR228C YNL217WP40152 326 aa0.5□□□□□ -2.33
PCF11YDR228C YRB2P40517 327 aa0.5□□□□□ -2.33
PCF11YDR228C HAM1P47119 197 aaKnown RBP0.5□□□□□ -2.33
PCF11YDR228C MSA1Q08471 629 aa0.5□□□□□ -2.33
PCF11YDR228C MSH5Q12175 901 aa0.5□□□□□ -2.33
PCF11YDR228C CDC8P00572 216 aa0.49□□□□□ -2.33
PCF11YDR228C IPP1P00817 287 aaKnown RBP0.49□□□□□ -2.33
PCF11YDR228C GAA1P39012 614 aa0.49□□□□□ -2.33
PCF11YDR228C YAR068WP39564 161 aa0.49□□□□□ -2.33
PCF11YDR228C HUA1P40325 198 aa0.49□□□□□ -2.33
PCF11YDR228C PGD1P40356 397 aa0.49□□□□□ -2.33
PCF11YDR228C RPL37BP51402 88 aaKnown RBP0.49□□□□□ -2.33
PCF11YDR228C ANT1Q06497 328 aa0.49□□□□□ -2.33
PCF11YDR228C YHR139C-AO13536 103 aa0.48□□□□□ -2.33
PCF11YDR228C POL30P15873 258 aaKnown RBP0.48□□□□□ -2.33
PCF11YDR228C DAL80P26343 269 aa0.48□□□□□ -2.33
PCF11YDR228C SGE1P33335 543 aa0.48□□□□□ -2.33
PCF11YDR228C RRF1P38771 230 aa0.48□□□□□ -2.33
PCF11YDR228C DOC1P53068 250 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms