RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YKR005CQ02203 525 aa3.97□□□□□ -1.77
NUP42YDR192C NCE101Q02820 53 aa3.97□□□□□ -1.77
NUP42YDR192C PEX10Q05568 337 aa3.97□□□□□ -1.77
NUP42YDR192C PBA1Q05778 276 aa3.97□□□□□ -1.77
NUP42YDR192C DCR2Q05924 578 aa3.97□□□□□ -1.77
NUP42YDR192C YDL109CQ12103 647 aa3.97□□□□□ -1.77
NUP42YDR192C MCP1Q12106 302 aa3.97□□□□□ -1.77
NUP42YDR192C YPR1Q12458 312 aa3.97□□□□□ -1.77
NUP42YDR192C YER078W-AQ3E7A2 54 aa3.97□□□□□ -1.77
NUP42YDR192C SUS1Q6WNK7 96 aa3.97□□□□□ -1.77
NUP42YDR192C MSW1P04803 379 aa3.96□□□□□ -1.78
NUP42YDR192C YSF3P0C074 85 aaPredicted RBP3.96□□□□□ -1.78
NUP42YDR192C ERD2P18414 219 aa3.96□□□□□ -1.78
NUP42YDR192C DEG1P31115 442 aaKnown RBP3.96□□□□□ -1.78
NUP42YDR192C FUN26P31381 517 aa3.96□□□□□ -1.78
NUP42YDR192C ARC19P33204 171 aaKnown RBP3.96□□□□□ -1.78
NUP42YDR192C SPT10P35208 640 aa3.96□□□□□ -1.78
NUP42YDR192C CHK1P38147 527 aa3.96□□□□□ -1.78
NUP42YDR192C ALP1P38971 573 aa3.96□□□□□ -1.78
NUP42YDR192C COX14P39103 70 aa3.96□□□□□ -1.78
NUP42YDR192C PFS2P42841 465 aaKnown RBP3.96□□□□□ -1.78
NUP42YDR192C MTM1P53320 366 aa3.96□□□□□ -1.78
NUP42YDR192C BOR1P53838 576 aa3.96□□□□□ -1.78
NUP42YDR192C NUP116Q02630 1113 aa3.96□□□□□ -1.78
NUP42YDR192C MAK3Q03503 176 aa3.96□□□□□ -1.78
NUP42YDR192C DML1Q03652 475 aa3.96□□□□□ -1.78
NUP42YDR192C OST6Q03723 332 aa3.96□□□□□ -1.78
NUP42YDR192C RVB1Q03940 463 aaKnown RBP3.96□□□□□ -1.78
NUP42YDR192C YTH1Q06102 208 aaPredicted RBP3.96□□□□□ -1.78
NUP42YDR192C ARV1Q06541 321 aa3.96□□□□□ -1.78
NUP42YDR192C SPC3Q12133 184 aa3.96□□□□□ -1.78
NUP42YDR192C RPC40P07703 335 aaKnown RBP3.95□□□□□ -1.78
NUP42YDR192C RPL12AP0CX53 165 aaKnown RBP3.95□□□□□ -1.78
NUP42YDR192C RPL12BP0CX54 165 aa3.95□□□□□ -1.78
NUP42YDR192C GCN3P14741 305 aa3.95□□□□□ -1.78
NUP42YDR192C GPI12P23797 304 aa3.95□□□□□ -1.78
NUP42YDR192C DOA4P32571 926 aa3.95□□□□□ -1.78
NUP42YDR192C TIM12P32830 109 aa3.95□□□□□ -1.78
NUP42YDR192C RPS27AP35997 82 aaKnown RBP3.95□□□□□ -1.78
NUP42YDR192C GPX2P38143 162 aa3.95□□□□□ -1.78
NUP42YDR192C SHE1P38200 338 aa3.95□□□□□ -1.78
NUP42YDR192C RPS27BP38711 82 aa3.95□□□□□ -1.78
NUP42YDR192C ECM34P38728 170 aa3.95□□□□□ -1.78
NUP42YDR192C NSG1P38837 291 aa3.95□□□□□ -1.78
NUP42YDR192C PTH1P38876 190 aaKnown RBP3.95□□□□□ -1.78
NUP42YDR192C KRE9P39005 276 aa3.95□□□□□ -1.78
NUP42YDR192C CCC1P47818 322 aa3.95□□□□□ -1.78
NUP42YDR192C SEH1P53011 349 aaKnown RBP3.95□□□□□ -1.78
NUP42YDR192C ARO8P53090 500 aaKnown RBP3.95□□□□□ -1.78
NUP42YDR192C YGR067CP53243 804 aa3.95□□□□□ -1.78
NUP42YDR192C GPI17Q04080 534 aa3.95□□□□□ -1.78
NUP42YDR192C ELP6Q04868 273 aa3.95□□□□□ -1.78
NUP42YDR192C BUR2Q05949 395 aa3.95□□□□□ -1.78
NUP42YDR192C COQ10Q08058 207 aa3.95□□□□□ -1.78
NUP42YDR192C RTC5Q12108 567 aaKnown RBP3.95□□□□□ -1.78
NUP42YDR192C ERV2Q12284 196 aa3.95□□□□□ -1.78
NUP42YDR192C RNH203Q12338 110 aa3.95□□□□□ -1.78
NUP42YDR192C STT4P37297 1900 aa3.95□□□□□ -1.78
NUP42YDR192C COX9P07255 59 aa3.94□□□□□ -1.78
NUP42YDR192C PRE7P23724 241 aaKnown RBP3.94□□□□□ -1.78
NUP42YDR192C EHD3P28817 500 aa3.94□□□□□ -1.78
NUP42YDR192C FAA1P30624 700 aaKnown RBP3.94□□□□□ -1.78
NUP42YDR192C HYM1P32464 399 aa3.94□□□□□ -1.78
NUP42YDR192C YEF1P32622 495 aa3.94□□□□□ -1.78
NUP42YDR192C ANR2P36090 516 aaPredicted RBP3.94□□□□□ -1.78
NUP42YDR192C YBR139WP38109 508 aa3.94□□□□□ -1.78
NUP42YDR192C STB1P42845 420 aa3.94□□□□□ -1.78
NUP42YDR192C ATG18P43601 500 aa3.94□□□□□ -1.78
NUP42YDR192C BNA6P43619 295 aa3.94□□□□□ -1.78
NUP42YDR192C YGR266WP53326 701 aa3.94□□□□□ -1.78
NUP42YDR192C PAU12P53343 120 aa3.94□□□□□ -1.78
NUP42YDR192C PGA1P53896 198 aa3.94□□□□□ -1.78
NUP42YDR192C AIM36Q03798 255 aa3.94□□□□□ -1.78
NUP42YDR192C YLR173WQ06247 608 aa3.94□□□□□ -1.78
NUP42YDR192C IRC19Q07843 230 aa3.94□□□□□ -1.78
NUP42YDR192C YEL009C-AA0A023PZF2 135 aa3.93□□□□□ -1.78
NUP42YDR192C NAM2P11325 894 aa3.93□□□□□ -1.78
NUP42YDR192C ERD1P16151 362 aa3.93□□□□□ -1.78
NUP42YDR192C EXG1P23776 448 aaKnown RBP3.93□□□□□ -1.78
NUP42YDR192C HOM6P31116 359 aaKnown RBP3.93□□□□□ -1.78
NUP42YDR192C RIB7P33312 244 aa3.93□□□□□ -1.78
NUP42YDR192C SRP102P36057 244 aaPredicted RBP3.93□□□□□ -1.78
NUP42YDR192C DTR1P38125 572 aa3.93□□□□□ -1.78
NUP42YDR192C PAU24P38155 120 aa3.93□□□□□ -1.78
NUP42YDR192C YBR137WP38276 179 aa3.93□□□□□ -1.78
NUP42YDR192C IPI1P38803 334 aaPredicted RBP3.93□□□□□ -1.78
NUP42YDR192C SMB1P40018 196 aaKnown RBP3.93□□□□□ -1.78
NUP42YDR192C SWM2P40342 146 aa3.93□□□□□ -1.78
NUP42YDR192C YIL029CP40538 142 aa3.93□□□□□ -1.78
NUP42YDR192C REE1P40893 198 aa3.93□□□□□ -1.78
NUP42YDR192C CUP9P41817 306 aa3.93□□□□□ -1.78
NUP42YDR192C RPA34P47006 233 aaPredicted RBP3.93□□□□□ -1.78
NUP42YDR192C IRC18P47056 224 aa3.93□□□□□ -1.78
NUP42YDR192C PMT5P52867 743 aa3.93□□□□□ -1.78
NUP42YDR192C YIP5P53108 310 aa3.93□□□□□ -1.78
NUP42YDR192C TPC1P53257 314 aa3.93□□□□□ -1.78
NUP42YDR192C YNR062CP53748 327 aa3.93□□□□□ -1.78
NUP42YDR192C CWC25P53854 179 aaKnown RBP3.93□□□□□ -1.78
NUP42YDR192C TIM11P81449 96 aaPredicted RBP3.93□□□□□ -1.78
NUP42YDR192C GRX5Q02784 150 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms