RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W OST1P41543 476 aaKnown RBP2.01□□□□□ -2.09
VPS41YDR080W NSA1P53136 463 aaPredicted RBP2.01□□□□□ -2.09
VPS41YDR080W AIM36Q03798 255 aa2.01□□□□□ -2.09
VPS41YDR080W RNH202Q05635 350 aa2.01□□□□□ -2.09
VPS41YDR080W YOL162WP0CF19 215 aa2.01□□□□□ -2.09
VPS41YDR080W CCA1P21269 546 aa2.01□□□□□ -2.09
VPS41YDR080W RPL32P38061 130 aaKnown RBP2.01□□□□□ -2.09
VPS41YDR080W LOH1P47055 219 aa2.01□□□□□ -2.09
VPS41YDR080W AVT4P50944 713 aa2.01□□□□□ -2.09
VPS41YDR080W YGL114WP53134 725 aa2.01□□□□□ -2.09
VPS41YDR080W RTN2Q12443 393 aa2.01□□□□□ -2.09
VPS41YDR080W MRPL23Q12487 163 aaPredicted RBP2.01□□□□□ -2.09
VPS41YDR080W THP2O13539 261 aaKnown RBP2.01□□□□□ -2.09
VPS41YDR080W COX2P00410 251 aa2.01□□□□□ -2.09
VPS41YDR080W OPI3P05375 206 aa2.01□□□□□ -2.09
VPS41YDR080W PMR1P13586 950 aa2.01□□□□□ -2.09
VPS41YDR080W NOP1P15646 327 aaKnown RBP2.01□□□□□ -2.09
VPS41YDR080W PHO85P17157 305 aa2.01□□□□□ -2.09
VPS41YDR080W PPA2P28239 310 aa2.01□□□□□ -2.09
VPS41YDR080W CTR2P38865 189 aa2.01□□□□□ -2.09
VPS41YDR080W FLX1P40464 311 aa2.01□□□□□ -2.09
VPS41YDR080W YDR248CQ03786 193 aa2.01□□□□□ -2.09
VPS41YDR080W PHO92Q06390 306 aa2.01□□□□□ -2.09
VPS41YDR080W THP1Q08231 455 aa2.01□□□□□ -2.09
VPS41YDR080W YDL199CQ12407 687 aa2.01□□□□□ -2.09
VPS41YDR080W SGA1P08019 549 aa2□□□□□ -2.09
VPS41YDR080W RHB1P25378 209 aa2□□□□□ -2.09
VPS41YDR080W BOS1P25385 244 aa2□□□□□ -2.09
VPS41YDR080W ZUO1P32527 433 aaKnown RBP2□□□□□ -2.09
VPS41YDR080W LTV1P34078 463 aa2□□□□□ -2.09
VPS41YDR080W SWD2P36104 329 aaPredicted RBP2□□□□□ -2.09
VPS41YDR080W WSC2P53832 503 aa2□□□□□ -2.09
VPS41YDR080W YMR166CQ03829 368 aa2□□□□□ -2.09
VPS41YDR080W SPG4Q04438 115 aa2□□□□□ -2.09
VPS41YDR080W YDL114WQ07530 308 aa2□□□□□ -2.09
VPS41YDR080W VPH2P32341 215 aa2□□□□□ -2.09
VPS41YDR080W PMU1P36069 295 aa2□□□□□ -2.09
VPS41YDR080W ANR2P36090 516 aaPredicted RBP2□□□□□ -2.09
VPS41YDR080W YGR168CP53293 376 aa2□□□□□ -2.09
VPS41YDR080W YNR048WP53740 393 aa2□□□□□ -2.09
VPS41YDR080W APJ1P53940 528 aa2□□□□□ -2.09
VPS41YDR080W HSP31Q04432 237 aa2□□□□□ -2.09
VPS41YDR080W YPT6Q99260 215 aa2□□□□□ -2.09
VPS41YDR080W YCR007CP25354 239 aa1.99□□□□□ -2.09
VPS41YDR080W INO2P26798 304 aa1.99□□□□□ -2.09
VPS41YDR080W IDH1P28834 360 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
VPS41YDR080W AUA1P32450 94 aa1.99□□□□□ -2.09
VPS41YDR080W MRE11P32829 692 aa1.99□□□□□ -2.09
VPS41YDR080W MCH2P36032 473 aa1.99□□□□□ -2.09
VPS41YDR080W SRP102P36057 244 aaPredicted RBP1.99□□□□□ -2.09
VPS41YDR080W YCR041WP37265 110 aa1.99□□□□□ -2.09
VPS41YDR080W SRO77P38163 1010 aa1.99□□□□□ -2.09
VPS41YDR080W PEX32P38292 413 aa1.99□□□□□ -2.09
VPS41YDR080W SPO73P40031 143 aa1.99□□□□□ -2.09
VPS41YDR080W SLM1P40485 686 aa1.99□□□□□ -2.09
VPS41YDR080W CCC1P47818 322 aa1.99□□□□□ -2.09
VPS41YDR080W BRR6P53062 197 aa1.99□□□□□ -2.09
VPS41YDR080W STD1Q02794 444 aa1.99□□□□□ -2.09
VPS41YDR080W UTP15Q04305 513 aaKnown RBP1.99□□□□□ -2.09
VPS41YDR080W NNT1Q05874 261 aa1.99□□□□□ -2.09
VPS41YDR080W HRT1Q08273 121 aa1.99□□□□□ -2.09
VPS41YDR080W ATR1P13090 542 aa1.99□□□□□ -2.09
VPS41YDR080W RRP7P25368 297 aaPredicted RBP1.99□□□□□ -2.09
VPS41YDR080W CBT1P36038 271 aaPredicted RBP1.99□□□□□ -2.09
VPS41YDR080W MTW1P39731 289 aa1.99□□□□□ -2.09
VPS41YDR080W YJL016WP47072 561 aa1.99□□□□□ -2.09
VPS41YDR080W CAB4P53332 305 aa1.99□□□□□ -2.09
VPS41YDR080W RRN5Q02983 363 aa1.99□□□□□ -2.09
VPS41YDR080W GPI17Q04080 534 aa1.99□□□□□ -2.09
VPS41YDR080W BBP1Q12365 385 aa1.99□□□□□ -2.09
VPS41YDR080W ATP10P18496 279 aa1.98□□□□□ -2.09
VPS41YDR080W RMD6P39975 231 aa1.98□□□□□ -2.09
VPS41YDR080W MPM1P40364 252 aa1.98□□□□□ -2.09
VPS41YDR080W STB1P42845 420 aa1.98□□□□□ -2.09
VPS41YDR080W ECM27P47144 725 aa1.98□□□□□ -2.09
VPS41YDR080W RSM27P53305 110 aa1.98□□□□□ -2.09
VPS41YDR080W MSO1P53604 210 aaKnown RBP1.98□□□□□ -2.09
VPS41YDR080W DBP9Q06218 594 aaKnown RBP1.98□□□□□ -2.09
VPS41YDR080W YMR105W-AQ8TGS8 64 aa1.98□□□□□ -2.09
VPS41YDR080W RPC40P07703 335 aaKnown RBP1.98□□□□□ -2.09
VPS41YDR080W TMA19P35691 167 aaKnown RBP1.98□□□□□ -2.09
VPS41YDR080W THI2P38141 450 aa1.98□□□□□ -2.09
VPS41YDR080W SOP4P39543 234 aaPredicted RBP1.98□□□□□ -2.09
VPS41YDR080W FIP1P45976 327 aa1.98□□□□□ -2.09
VPS41YDR080W TPS1Q00764 495 aaKnown RBP1.98□□□□□ -2.09
VPS41YDR080W SKI7Q08491 747 aaPredicted RBP1.98□□□□□ -2.09
VPS41YDR080W SYC1Q08553 188 aaPredicted RBP1.98□□□□□ -2.09
VPS41YDR080W YCR100CP25606 316 aa1.98□□□□□ -2.09
VPS41YDR080W RPC19P28000 142 aaKnown RBP1.98□□□□□ -2.09
VPS41YDR080W YKL075CP36083 450 aa1.98□□□□□ -2.09
VPS41YDR080W YBR063CP38083 404 aa1.98□□□□□ -2.09
VPS41YDR080W ADH5P38113 351 aaKnown RBP1.98□□□□□ -2.09
VPS41YDR080W FZO1P38297 855 aa1.98□□□□□ -2.09
VPS41YDR080W NAS2P40555 220 aa1.98□□□□□ -2.09
VPS41YDR080W NUP49Q02199 472 aa1.98□□□□□ -2.09
VPS41YDR080W ABZ2Q03266 374 aa1.98□□□□□ -2.09
VPS41YDR080W HOR7Q05827 59 aa1.98□□□□□ -2.09
VPS41YDR080W YLR108CQ12259 485 aa1.98□□□□□ -2.09
VPS41YDR080W MES1P00958 751 aaKnown RBP1.97□□□□□ -2.09
VPS41YDR080W SNF6P18888 332 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms