RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC5, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC5YDR059C SHC1P39000 512 aa1.72□□□□□ -2.13
UBC5YDR059C PRE6P40303 254 aaKnown RBP1.72□□□□□ -2.13
UBC5YDR059C POG1P40473 351 aa1.72□□□□□ -2.13
UBC5YDR059C YKE4P40544 346 aa1.72□□□□□ -2.13
UBC5YDR059C DSK2P48510 373 aa1.72□□□□□ -2.13
UBC5YDR059C NUP57P48837 541 aa1.72□□□□□ -2.13
UBC5YDR059C MRS2Q01926 470 aa1.72□□□□□ -2.13
UBC5YDR059C VPS60Q03390 229 aa1.72□□□□□ -2.13
UBC5YDR059C YML018CQ03730 393 aa1.72□□□□□ -2.13
UBC5YDR059C YPR098CQ06089 161 aa1.72□□□□□ -2.13
UBC5YDR059C ARR2Q06597 130 aa1.72□□□□□ -2.13
UBC5YDR059C YLR126CQ12288 251 aa1.72□□□□□ -2.13
UBC5YDR059C YAL064W-BO13512 126 aa1.71□□□□□ -2.14
UBC5YDR059C SPT3P06844 337 aa1.71□□□□□ -2.14
UBC5YDR059C BCY1P07278 416 aaKnown RBP1.71□□□□□ -2.14
UBC5YDR059C SNA3P14359 133 aa1.71□□□□□ -2.14
UBC5YDR059C URA6P15700 204 aa1.71□□□□□ -2.14
UBC5YDR059C PPH21P23594 369 aa1.71□□□□□ -2.14
UBC5YDR059C CDC13P32797 924 aaKnown RBP1.71□□□□□ -2.14
UBC5YDR059C KDX1P36005 433 aa1.71□□□□□ -2.14
UBC5YDR059C SRY1P36007 326 aa1.71□□□□□ -2.14
UBC5YDR059C VPS51P36116 164 aa1.71□□□□□ -2.14
UBC5YDR059C YCR087C-AP37263 153 aa1.71□□□□□ -2.14
UBC5YDR059C HEK2P38199 381 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
UBC5YDR059C YHL049CP38722 271 aa1.71□□□□□ -2.14
UBC5YDR059C COG3P40094 801 aa1.71□□□□□ -2.14
UBC5YDR059C SNZ3P43545 298 aa1.71□□□□□ -2.14
UBC5YDR059C YJR141WP47172 347 aaPredicted RBP1.71□□□□□ -2.14
UBC5YDR059C OST3P48439 350 aa1.71□□□□□ -2.14
UBC5YDR059C SNZ2P53824 298 aa1.71□□□□□ -2.14
UBC5YDR059C YNL247WP53852 767 aaKnown RBP1.71□□□□□ -2.14
UBC5YDR059C YNL140CP53910 189 aa1.71□□□□□ -2.14
UBC5YDR059C RHO3Q00245 231 aaKnown RBP1.71□□□□□ -2.14
UBC5YDR059C OSH6Q02201 448 aa1.71□□□□□ -2.14
UBC5YDR059C SNO1Q03144 224 aa1.71□□□□□ -2.14
UBC5YDR059C PRM15Q03262 622 aa1.71□□□□□ -2.14
UBC5YDR059C SDC1Q03323 175 aa1.71□□□□□ -2.14
UBC5YDR059C SEI1Q06058 285 aa1.71□□□□□ -2.14
UBC5YDR059C YOR292CQ08743 309 aa1.71□□□□□ -2.14
UBC5YDR059C RRS1Q08746 203 aaKnown RBP1.71□□□□□ -2.14
UBC5YDR059C USB1Q12208 290 aaKnown RBP1.71□□□□□ -2.14
UBC5YDR059C TPO4Q12256 659 aa1.71□□□□□ -2.14
UBC5YDR059C YHR139C-AO13536 103 aa1.7□□□□□ -2.14
UBC5YDR059C DBF2P22204 572 aa1.7□□□□□ -2.14
UBC5YDR059C MEI4P29467 408 aa1.7□□□□□ -2.14
UBC5YDR059C FES1P38260 290 aa1.7□□□□□ -2.14
UBC5YDR059C AME1P38313 324 aa1.7□□□□□ -2.14
UBC5YDR059C GRE3P38715 327 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
UBC5YDR059C TRM5P38793 499 aa1.7□□□□□ -2.14
UBC5YDR059C YHR127WP38833 243 aaKnown RBP1.7□□□□□ -2.14
UBC5YDR059C SUR2P38992 349 aa1.7□□□□□ -2.14
UBC5YDR059C KRE29P40026 464 aa1.7□□□□□ -2.14
UBC5YDR059C AVT7P40501 490 aa1.7□□□□□ -2.14
UBC5YDR059C MRPL49P40858 161 aaPredicted RBP1.7□□□□□ -2.14
UBC5YDR059C DAN1P47178 298 aa1.7□□□□□ -2.14
UBC5YDR059C PRP24P49960 444 aaKnown RBP1.7□□□□□ -2.14
UBC5YDR059C NSA1P53136 463 aaPredicted RBP1.7□□□□□ -2.14
UBC5YDR059C YGL034CP53186 121 aa1.7□□□□□ -2.14
UBC5YDR059C SLX9P53251 210 aaPredicted RBP1.7□□□□□ -2.14
UBC5YDR059C FMP41P53889 259 aaKnown RBP1.7□□□□□ -2.14
UBC5YDR059C YLR460CP54007 376 aa1.7□□□□□ -2.14
UBC5YDR059C SPG4Q04438 115 aa1.7□□□□□ -2.14
UBC5YDR059C YPL150WQ12152 901 aa1.7□□□□□ -2.14
UBC5YDR059C SNU23Q12368 194 aaPredicted RBP1.7□□□□□ -2.14
UBC5YDR059C PUT1P09368 476 aa1.69□□□□□ -2.14
UBC5YDR059C YKR104WP0CE69 306 aa1.69□□□□□ -2.14
UBC5YDR059C RPL4AP10664 362 aaKnown RBP1.69□□□□□ -2.14
UBC5YDR059C ZWF1P11412 505 aaKnown RBP1.69□□□□□ -2.14
UBC5YDR059C GCY1P14065 312 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
UBC5YDR059C DPB2P24482 689 aaPredicted RBP1.69□□□□□ -2.14
UBC5YDR059C IFM1P25038 676 aa1.69□□□□□ -2.14
UBC5YDR059C OAC1P32332 324 aa1.69□□□□□ -2.14
UBC5YDR059C MRPL3P36516 390 aa1.69□□□□□ -2.14
UBC5YDR059C ECM13P38195 257 aa1.69□□□□□ -2.14
UBC5YDR059C SRP14P38985 146 aa1.69□□□□□ -2.14
UBC5YDR059C SEN34P39707 275 aa1.69□□□□□ -2.14
UBC5YDR059C IRC18P47056 224 aa1.69□□□□□ -2.14
UBC5YDR059C TMA22P47089 198 aaPredicted RBP1.69□□□□□ -2.14
UBC5YDR059C MCM22P47167 239 aa1.69□□□□□ -2.14
UBC5YDR059C RPL4BP49626 362 aaKnown RBP1.69□□□□□ -2.14
UBC5YDR059C MIG2P53035 382 aa1.69□□□□□ -2.14
UBC5YDR059C BRR6P53062 197 aa1.69□□□□□ -2.14
UBC5YDR059C MMS2P53152 137 aa1.69□□□□□ -2.14
UBC5YDR059C FYV6P53913 173 aa1.69□□□□□ -2.14
UBC5YDR059C YNL046WP53956 172 aa1.69□□□□□ -2.14
UBC5YDR059C YML096WQ04489 525 aa1.69□□□□□ -2.14
UBC5YDR059C HEM25Q07534 307 aa1.69□□□□□ -2.14
UBC5YDR059C YDL144CQ07589 356 aa1.69□□□□□ -2.14
UBC5YDR059C BRX1Q08235 291 aaKnown RBP1.69□□□□□ -2.14
UBC5YDR059C YNG1Q08465 219 aa1.69□□□□□ -2.14
UBC5YDR059C MSA1Q08471 629 aa1.69□□□□□ -2.14
UBC5YDR059C PRR2Q12310 699 aa1.69□□□□□ -2.14
UBC5YDR059C YAL063C-AQ3E791 96 aa1.69□□□□□ -2.14
UBC5YDR059C CDC28P00546 298 aaKnown RBP1.68□□□□□ -2.14
UBC5YDR059C RPL26AP05743 127 aaKnown RBP1.68□□□□□ -2.14
UBC5YDR059C HIS3P06633 220 aa1.68□□□□□ -2.14
UBC5YDR059C COS2P0CX12 379 aa1.68□□□□□ -2.14
UBC5YDR059C COS3P0CX13 379 aa1.68□□□□□ -2.14
UBC5YDR059C ERD2P18414 219 aa1.68□□□□□ -2.14
UBC5YDR059C YKR041WP36134 250 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 128.6 ms