RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA2	YBR293W	YKL033W-A	Q86ZR7	236 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	TY2A-DR3	Q99303	438 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	YRF1-3	P0CX14	1859 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	YRF1-7	P0CX15	1859 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	YRF1-6	P53819	1859 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	SLH1	P53327	1967 aa	Known RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	COX3	P00420	269 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	APE1	P14904	514 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	DAL82	P21705	255 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	ELO2	P25358	347 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	PUT3	P25502	979 aa	Predicted RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	YHL044W	P38727	235 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	YHR177W	P38867	453 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	MET30	P39014	640 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	SMB1	P40018	196 aa	Known RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	TES1	P41903	349 aa	Known RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	UBX6	P47049	396 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	YGR149W	P48236	432 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	BNS1	P50084	137 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	THG1	P53215	237 aa	Known RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	PAU12	P53343	120 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	YNR061C	P53747	219 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	ACT1	P60010	375 aa	Known RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	TMA23	Q03525	211 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	ADH6	Q04894	360 aa	Known RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	YLR456W	Q06199	204 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	MCH1	Q07376	486 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
VBA2	YBR293W	YOR385W	Q08909	290 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	SRL2	Q12020	392 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	RDL1	Q12305	139 aa	Known RBP	4.04	□□□□□ -1.76
VBA2	YBR293W	PST1	Q12355	444 aa		4.04	□□□□□ -1.76
VBA2	YBR293W	ANB1	P19211	157 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	RBK1	P25332	333 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	UTR5	P32630	166 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	QDR3	P38227	689 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	FMO1	P38866	432 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	PTH1	P38876	190 aa	Known RBP	4.03	□□□□□ -1.76
VBA2	YBR293W	YHR210C	P38893	341 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	NSA2	P40078	261 aa	Known RBP	4.03	□□□□□ -1.76
VBA2	YBR293W	PUG1	P40100	303 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	PAU5	P43575	122 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	RPN11	P43588	306 aa	Known RBP	4.03	□□□□□ -1.76
VBA2	YBR293W	RPS10B	P46784	105 aa	Known RBP	4.03	□□□□□ -1.76
VBA2	YBR293W	YGL262W	P53054	175 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	YGR079W	P53249	370 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	YAP1802	P53309	568 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	SMM1	P53720	384 aa	Known RBP	4.03	□□□□□ -1.76
VBA2	YBR293W	DIA1	P54005	336 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	RCE1	Q03530	315 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	TMN2	Q04562	672 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	ELP6	Q04868	273 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	AAD4	Q07747	329 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	RPS10A	Q08745	105 aa	Predicted RBP	4.03	□□□□□ -1.76
VBA2	YBR293W	TGL5	Q12043	749 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	YCT1	Q12235	531 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	HUT1	Q12520	339 aa		4.03	□□□□□ -1.76
VBA2	YBR293W	TDH2	P00358	332 aa	Known RBP	4.02	□□□□□ -1.77
VBA2	YBR293W	YFL068W	P0CX99	160 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	YLL066W-A	P0CY00	160 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	YLL067W-A	P0CY01	160 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	NUP1	P20676	1076 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	PAU2	P32612	120 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	ALK2	P32789	676 aa	Predicted RBP	4.02	□□□□□ -1.77
VBA2	YBR293W	LSM2	P38203	95 aa	Known RBP	4.02	□□□□□ -1.77
VBA2	YBR293W	REG2	P38232	338 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	URA8	P38627	578 aa	Predicted RBP	4.02	□□□□□ -1.77
VBA2	YBR293W	TRR2	P38816	342 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	ACA1	P39970	489 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	PHS1	P40857	217 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	RMD8	P43620	662 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	VHT1	P53241	593 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	YGR066C	P53242	292 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	EOS1	P53938	366 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	MZM1	Q03429	123 aa	Predicted RBP	4.02	□□□□□ -1.77
VBA2	YBR293W	HLR1	Q04429	423 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	YMR252C	Q04814	134 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	BSP1	Q06604	576 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	YLR030W	Q07967	263 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	FSF1	Q12029	327 aa	Known RBP	4.02	□□□□□ -1.77
VBA2	YBR293W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
VBA2	YBR293W	PRR2	Q12310	699 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	SWM1	Q12379	170 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	ICT1	Q12385	394 aa		4.02	□□□□□ -1.77
VBA2	YBR293W	PAR32	Q12515	295 aa	Known RBP	4.02	□□□□□ -1.77
VBA2	YBR293W	BNI1	P41832	1953 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	MES1	P00958	751 aa	Known RBP	4.01	□□□□□ -1.77
VBA2	YBR293W	PAI3	P01094	68 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	BGL2	P15703	313 aa	Known RBP	4.01	□□□□□ -1.77
VBA2	YBR293W	RPB5	P20434	215 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	GLC7	P32598	312 aa	Known RBP	4.01	□□□□□ -1.77
VBA2	YBR293W	THI2	P38141	450 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	WSS1	P38838	269 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	PAC2	P39937	518 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	HEM14	P40012	539 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	YIL067C	P40514	678 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	YGR250C	P53316	781 aa	Known RBP	4.01	□□□□□ -1.77
VBA2	YBR293W	YNL184C	P53876	108 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	MET31	Q03081	177 aa		4.01	□□□□□ -1.77
VBA2	YBR293W	ADD37	Q03233	198 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms